Gene Information

Name : Gbro_1653 (Gbro_1653)
Accession : YP_003272816.1
Strain : Gordonia bronchialis DSM 43247
Genome accession: NC_013441
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 1725459 - 1726223 bp
Length : 765 bp
Strand : +
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: kpn:KPN_02151 ATP-binding component of citrate-dependent iron(III) transport protein

DNA sequence : 
ATGACTCTGGAGGCCAAGGGACTCTCGTGGAGCCGTGGCGGCAACCTGGTCCTCGACGACGTGACGTTGCGCCCCACAGA
GGGGGAGACCATCGGCATCCTGGGCCCCAACGGGTCGGGGAAGTCGTCGCTGCTGCGTGCTCTCGGTGGCCTCGCGCATC
CCCAGCAGGGGACGGTGACCCTGGAGGGCACCGACATCCGGCGGCTACGTCGACGGCAGATCGCGCGGCGGGTCGCGATG
GTCTCCCAGCACGCGACCACCGATGTCGATCTCGCCGTCATCGATGTGGTCCGGCTCGGACGCATCCCACACAGTTCGGC
CTTCGGCGGCGACGACGAGGGTGAACGCGTCGTCGCCGACGCGATCGCGCGCACCGGGCTCACCGACAAGGCACATGACC
TGTGGCACACCCTGTCCGGGGGTGAGCAGCAGCGTGCCCAGATAGCTCGCGCACTGGCACAGGAGCCGCGGGAACTGCTG
CTCGACGAGCCGACCAATCACCTCGACATCCACCATCAACTCGAACTGCTCGACTTCGTCGCCGCGCTACCGGTGACCAG
CTACCTGGCCCTGCACGACCTCAATCACGCGTCGATGTTCTGCGATCGTGTGCTGATCCTGCGCCGCGGAGCGGTGGTGG
CCTTCGGTGAGCCCCACGAGGTGCTCACCGAAGGCCTCATCGCCGAGGTCTACCGGGTGGGTGTGGACGTGGTGGTCTCC
TCCGACGGCACCCGAACGGTGTTGTTCCGCCGGCCGTCGGCCTGA

Protein sequence : 
MTLEAKGLSWSRGGNLVLDDVTLRPTEGETIGILGPNGSGKSSLLRALGGLAHPQQGTVTLEGTDIRRLRRRQIARRVAM
VSQHATTDVDLAVIDVVRLGRIPHSSAFGGDDEGERVVADAIARTGLTDKAHDLWHTLSGGEQQRAQIARALAQEPRELL
LDEPTNHLDIHHQLELLDFVAALPVTSYLALHDLNHASMFCDRVLILRRGAVVAFGEPHEVLTEGLIAEVYRVGVDVVVS
SDGTRTVLFRRPSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 2e-30 45
phuC YP_005684259.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 2e-16 42
phuC YP_005686351.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 2e-16 42
phuC YP_005682167.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 2e-16 42
cpfrc_01918 YP_003784318.1 hypothetical protein Not tested PiCp 7 Protein 2e-16 42
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-21 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Gbro_1653 YP_003272816.1 ABC transporter-like protein BAC0164 Protein 1e-21 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Gbro_1653 YP_003272816.1 ABC transporter-like protein VFG0925 Protein 4e-25 42
Gbro_1653 YP_003272816.1 ABC transporter-like protein VFG1042 Protein 9e-22 41