Gene Information

Name : Gbro_1324 (Gbro_1324)
Accession : YP_003272504.1
Strain : Gordonia bronchialis DSM 43247
Genome accession: NC_013441
Putative virulence/resistance : Virulence
Product : response regulator receiver
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1385898 - 1386569 bp
Length : 672 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: glo:Glov_0998 transcriptional regulator

DNA sequence : 
GTGCACGCGCTCGTCGTCGACGACGATCCCGGGGTTGCCGAGACGGTACGTCGTGCCCTGGTCAGCGACGGCTGGGCCGT
CACCGTGGCGCACGACGGCGTCGACGGTCTCTGGAAGGCCACCGAAGGCAGCCATGACGTGATCGTTCTCGACATCATGC
TGCCGGGTCACAACGGCTACGTGGTGGTCCGGGAACTGCGGGCGCGCGGCATCTGGACCCCGGTGGTCATGCTCACCGCC
AAGGACGGTGAGTACGACCAGGCCGAGGCGCTCGACGCGGGCGCCGATGACTATCTGGTCAAACCGTTCTCCGTGGTGGT
CCTCAAGGCGCATCTGCGAGCCCTGCTGCGGCGCGGCGTGCGGGAACGGCCGGCGCGGCTGGTGGCCGGTGACCTCGTGG
TGGATCCCGCCGAGCACACCGTCACCCGCGGCCAGACTCCGATCACGTTGACACCACGCGAATTCGCGGTCCTCGAATAC
CTCATCCGCAACGCCGACACCGTGGTCTCCAAATGCGAGATCGTGCGGTCGGTGTGGGACGAGAACTTCGACGGCGACGC
CAACATCGTCGAGGTGTACGTCGGCTACCTGCGCAAACGGATCGACACCCCGTTCGGGAAGCGTTCCATCGAGACCGTGC
GCGGGGCTGGATACCGGCTGCGGTCGGAGTGA

Protein sequence : 
MHALVVDDDPGVAETVRRALVSDGWAVTVAHDGVDGLWKATEGSHDVIVLDIMLPGHNGYVVVRELRARGIWTPVVMLTA
KDGEYDQAEALDAGADDYLVKPFSVVVLKAHLRALLRRGVRERPARLVAGDLVVDPAEHTVTRGQTPITLTPREFAVLEY
LIRNADTVVSKCEIVRSVWDENFDGDANIVEVYVGYLRKRIDTPFGKRSIETVRGAGYRLRSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 6e-35 44
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 4e-34 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Gbro_1324 YP_003272504.1 response regulator receiver BAC0125 Protein 2e-38 44
Gbro_1324 YP_003272504.1 response regulator receiver BAC0083 Protein 5e-36 42
Gbro_1324 YP_003272504.1 response regulator receiver BAC0111 Protein 9e-38 42
Gbro_1324 YP_003272504.1 response regulator receiver BAC0197 Protein 4e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Gbro_1324 YP_003272504.1 response regulator receiver VFG1390 Protein 6e-42 46
Gbro_1324 YP_003272504.1 response regulator receiver VFG0596 Protein 2e-35 44
Gbro_1324 YP_003272504.1 response regulator receiver VFG1386 Protein 8e-39 43