Gene Information

Name : Gbro_0997 (Gbro_0997)
Accession : YP_003272201.1
Strain : Gordonia bronchialis DSM 43247
Genome accession: NC_013441
Putative virulence/resistance : Virulence
Product : response regulator receiver
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1061791 - 1062477 bp
Length : 687 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: gbm:Gbem_1865 transcriptional regulator

DNA sequence : 
GTGACCCACGTTCTGATTGTCGAGGACGAGGAATCGCTGGCGGATCCGCTGGCCTTCCTGCTGCGTAAAGAAGGCTTCGA
GGCGAGTGTCGTCAACGACGGAGCCCAGGCGCTGTCCACATTCGACCGCGTCAGCCCCGACATCGTCCTCCTCGACCTGA
TGCTGCCCGGCATGTCCGGTACCGAGATCTGCAAAGCGCTGCGCACCAGGTCATCGGTGCCGGTCATCATGGTGACCGCG
CGTGACAGCGAGATCGACAAGGTGGTGGGCCTCGAACTCGGGGCCGATGACTATGTCACCAAACCGTATTCGGCCCGCGA
GCTGATCGCCCGGATCCGTGCGGTACTGCGGCGCGGCGGCGACCTCGCCGAGGAGGACCTCGACATCGGCATCCTGGAGG
CCGGTCCGGTCCGGATGGACGTCGAACGCCACATCGTGGCCGTCAACGGGGAGCAGATCACGTTGCCGCTCAAGGAATTC
GATCTACTCGAGTACCTGTTGCGCAACGCCGGGCGGGTACTGACCCGCGGTCAGCTCATCGACCGGGTATGGGGCGCGGA
CTACGTGGGTGACACCAAGACACTCGACGTCCACGTCAAGCGGCTGCGGTCCAAGATCGAGCCCGACCCGGCAAACCCGA
AGCACCTCATCACCGTTCGAGGATTGGGTTACAAGCTCGAGGCCTGA

Protein sequence : 
MTHVLIVEDEESLADPLAFLLRKEGFEASVVNDGAQALSTFDRVSPDIVLLDLMLPGMSGTEICKALRTRSSVPVIMVTA
RDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGDLAEEDLDIGILEAGPVRMDVERHIVAVNGEQITLPLKEF
DLLEYLLRNAGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRSKIEPDPANPKHLITVRGLGYKLEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 1e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Gbro_0997 YP_003272201.1 response regulator receiver AE000516.2.gene3505. Protein 5e-47 50
Gbro_0997 YP_003272201.1 response regulator receiver HE999704.1.gene2815. Protein 2e-47 45
Gbro_0997 YP_003272201.1 response regulator receiver NC_002952.2859905.p0 Protein 4e-48 45
Gbro_0997 YP_003272201.1 response regulator receiver NC_009782.5559369.p0 Protein 4e-48 45
Gbro_0997 YP_003272201.1 response regulator receiver NC_002951.3237708.p0 Protein 4e-48 45
Gbro_0997 YP_003272201.1 response regulator receiver NC_002758.1121668.p0 Protein 4e-48 45
Gbro_0997 YP_003272201.1 response regulator receiver NC_009641.5332272.p0 Protein 4e-48 45
Gbro_0997 YP_003272201.1 response regulator receiver NC_012469.1.7685629. Protein 1e-49 45
Gbro_0997 YP_003272201.1 response regulator receiver NC_013450.8614421.p0 Protein 4e-48 45
Gbro_0997 YP_003272201.1 response regulator receiver NC_007793.3914279.p0 Protein 4e-48 45
Gbro_0997 YP_003272201.1 response regulator receiver NC_003923.1003749.p0 Protein 4e-48 45
Gbro_0997 YP_003272201.1 response regulator receiver NC_002745.1124361.p0 Protein 4e-48 45
Gbro_0997 YP_003272201.1 response regulator receiver NC_007622.3794472.p0 Protein 4e-48 45
Gbro_0997 YP_003272201.1 response regulator receiver NC_012469.1.7686381. Protein 5e-48 44
Gbro_0997 YP_003272201.1 response regulator receiver BAC0308 Protein 1e-32 43
Gbro_0997 YP_003272201.1 response regulator receiver AE016830.1.gene1681. Protein 4e-48 43
Gbro_0997 YP_003272201.1 response regulator receiver BAC0197 Protein 1e-33 43
Gbro_0997 YP_003272201.1 response regulator receiver HE999704.1.gene1528. Protein 1e-31 42
Gbro_0997 YP_003272201.1 response regulator receiver AE015929.1.gene1106. Protein 4e-33 41
Gbro_0997 YP_003272201.1 response regulator receiver BAC0347 Protein 8e-32 41
Gbro_0997 YP_003272201.1 response regulator receiver BAC0125 Protein 4e-35 41
Gbro_0997 YP_003272201.1 response regulator receiver BAC0083 Protein 1e-34 41
Gbro_0997 YP_003272201.1 response regulator receiver CP001918.1.gene5135. Protein 1e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Gbro_0997 YP_003272201.1 response regulator receiver VFG1389 Protein 1e-31 42
Gbro_0997 YP_003272201.1 response regulator receiver VFG1563 Protein 6e-38 41
Gbro_0997 YP_003272201.1 response regulator receiver VFG1386 Protein 3e-35 41