Gene Information

Name : Hoch_6841 (Hoch_6841)
Accession : YP_003271198.1
Strain : Haliangium ochraceum DSM 14365
Genome accession: NC_013440
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0691
EC number : -
Position : 9375636 - 9376124 bp
Length : 489 bp
Strand : -
Note : TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; KEGG: dat:HRM2_19040 SmpB

DNA sequence :
ATGGCCAAGAAGAACCGCAGGCAGACCACGATCCCCGAGGGCGCGCGCGTGCTGGCACGCAATCGCCGCGCGCTCCACGA
CTACGAGATCCACGACGTCGTCGAGGCCGGGATCGTCCTCGTGGGCTCGGAGGTCAAATCGCTGCGCGACTCGCACGCGC
ACCTCAACGACGCCCACGCCGAGATCCAGAGCGACGAAGCCTGGCTGATCAACGCCAAGATCGAAGAGTATCCGTGGGCC
AATCAGTTCAATCACGAGCCCACGCGGCGGCGCAAACTGCTGCTGCACAAGCACGAAATCAGCCGTCTGGGCATCAAGAC
CCAGCAGCGCGGCTTCACCCTGGTGCCGCTGGCCGTGTACCTCAAAGACGGCAAAATCAAAGTCGAGCTGGCGCTGGGCT
CGGGCAAGAAAGAGTACGAGAAGCGCAACGTGACCCGCGAGACCGAGGCGCAGCGCGATATCGACCGCGCGCTCAAGCGC
GCCCGCTGA

Protein sequence :
MAKKNRRQTTIPEGARVLARNRRALHDYEIHDVVEAGIVLVGSEVKSLRDSHAHLNDAHAEIQSDEAWLINAKIEEYPWA
NQFNHEPTRRRKLLLHKHEISRLGIKTQQRGFTLVPLAVYLKDGKIKVELALGSGKKEYEKRNVTRETEAQRDIDRALKR
AR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 4e-32 50
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 1e-29 46