Gene Information

Name : Hoch_6800 (Hoch_6800)
Accession : YP_003271157.1
Strain : Haliangium ochraceum DSM 14365
Genome accession: NC_013440
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 9326869 - 9327831 bp
Length : 963 bp
Strand : +
Note : KEGG: hch:HCH_00291 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: porphobilinogen deaminase

DNA sequence :
ATGAGCGAGCGAACCATCCACATCTCGACCCGCGGCAGCCAGCTAGCGCTGTGGCAGGCCCATCACGTGCGCGACGAGAT
CCGCCGCGTGCGCCCCGCGTGGCAGGTCGAGCTGGTCATCATCAAGACCCAGGGCGATAAGATCCTCGACGTCCCGCTGT
CCAAAATCGGCGGCAAAGCGCTGTTCGTAAAAGAGATCGAGCAGGCGCTGCTCGACGGTCGCGCCGACGTCGCCGTGCAC
AGCATGAAGGACGTGCCCGCCGAGCTGGCGCCGGGCCTGTTCATGGCCGCGACCAGCCGCCGCGAAGACCCCTACGACGC
GCTGTGCACGCGCGACGGACGCGGTCTCGACGAGCTCGCCGAAGGCGCCACCCTGGGCACCTCGAGCTTGCGCCGGCAGT
GCCAGATCTTGGCCAGGCGTCCGGATTTGCGCATCGAGATGCTGCGCGGCAACGTGCCCACGCGGCTCGGCAAGCTCGAC
GACGGCAGCTTCGACGCCGTGATCCTGGCCGCGGCCGGGCTCAAGCGTCTGGGCCACGGCGAGCGCATCAGCCAGCGCCT
CGACGGCGGCGTGTGCGTGCCCGCGGTCGGTCAGGGCGTGCTCGGCATCGAGACCCGCCAGGGCGACGCGCCCGCGGATC
GCGAGCTGGTCGAGGCTCTGCGCGAGGCCCTGCACGACCCCGCGGAAGAGCGCCGCGTGGTCGCCGAGCGCGCGATGATG
GCCGCGCTCGGCGGGAGCTGCCAGACCCCGCTGGCCGCGCACGCCAGCTATCGCGGCGACAGCGATCCGGTCGCCGGCAC
GCTGGTGATCGAGGGCCTGTGCGGACGGCCGGACGGCAGCGAGATCCTGCGCGCGCAGGTCGAGGGTCGCGCCGAGGACG
CGCAGGCGCTCGGCAGCTCGCTGGCAGAGGAGCTGCGCGGGCAGGGCGCGCAGGCGATTATCGACGCCTGCACCAGCGCC
TGA

Protein sequence :
MSERTIHISTRGSQLALWQAHHVRDEIRRVRPAWQVELVIIKTQGDKILDVPLSKIGGKALFVKEIEQALLDGRADVAVH
SMKDVPAELAPGLFMAATSRREDPYDALCTRDGRGLDELAEGATLGTSSLRRQCQILARRPDLRIEMLRGNVPTRLGKLD
DGSFDAVILAAAGLKRLGHGERISQRLDGGVCVPAVGQGVLGIETRQGDAPADRELVEALREALHDPAEERRVVAERAMM
AALGGSCQTPLAAHASYRGDSDPVAGTLVIEGLCGRPDGSEILRAQVEGRAEDAQALGSSLAEELRGQGAQAIIDACTSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 5e-61 53
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 5e-61 53