|
Name : Hoch_6707 (Hoch_6707) Accession : YP_003271064.1 Strain : Haliangium ochraceum DSM 14365 Genome accession: NC_013440 Putative virulence/resistance : Resistance Product : cystathionine gamma-lyase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0626 EC number : 4.4.1.1 Position : 9203470 - 9204642 bp Length : 1173 bp Strand : + Note : PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: acp:A2cp1_3847 cystathionine gamma-lyase DNA sequence : ATGGGCTCTCGTCCGCCTTCCCACGGCTTTGGCACCCGCGCCATCCACGCCGGCCAATCCCCTGACCCCAGCACCGGCGC GATCATGACGCCGGTCTACATGACCTCCACCTACGTGCAGAGCACGCCGGGGGAACACAAGGGCTTCGAGTACTCGCGCA CGCAGAACCCGACCCGTTCGGCGCTCGAGGCCAACCTCGCCGCGCTCGAGGGCGCGCGCCACGGGCTGGCCTTCGCCTCC GGTCTGGCCGCGACCTCGACCGCGCTGCAGCTCCTGTCGGCGGGCGATCACGTGGTCGCCTGCGATGACCTCTACGGCGG CACCTATCGCCTCTTCGACAAGGTGTATCGCCGCTTCGGGCTGTCCTTCGACTACGTGGATCCCAGCGCGGGTCCCAGCG CCGTCGAGGCCGCGCTCACCGACGCGACCCGCATGGTGTGGCTGGAGACGCCGACCAACCCGATGCTCAAGCTGTGCGAC ATCGCGGCCGTGGCCGAGCTGTGCAAGCGGCGCGGGCTGCTGCTGGCGGTCGACAACACTTTCCTCACGCCCTTCAACCA GAACCCGCTGGCCCTGGGCGCGGACCTGGTCTGTCACTCGACGACCAAGTACCTCAACGGCCACTCCGACACCGTCGGCG GCGCGCTCATCACCGATAACGACGAGCTGCACGAGAAGCTCGCGTTCCTGCAGAACGCGGTCGGCGCGGTGCCCTCGCCC ATGGACTCGTTCCTGGTCATGCGCGGGCTCAAGACCCTGCACGTGCGCATGGAGCGGCACGAGCGCAACGCGCGCGCGCT GGCCGAGTGGCTCGTGGGACACGAGCAGGTCGAGCGCGTCATCTACCCCGGCCTCGAGAGTCACCCGCAGCACGAGCTGG CCAAGCGCCAACAGCGCGGCTTCGGCGGCATGATCAGCTTCGATCTGCGCGGCGGCGAGCCGGCTGCGCGGCGCTTCCTC GAGACCTGCGAGCTGTTCTCGCTGGCTGAGTCGCTCGGCGGTGTCGAGTCATTGGTCGAGCATCCGGCCATTATGACCCA CGCCAGCGTGCCGGCCGAGCGCCGTCGCGCGCTCGGGATCGGCGATGGCTTCATCCGCCTGAGCGTCGGCATCGAAGAGC TGGACGACCTCCGTGGTGATCTAGAACGCGCTTTTTTCGCCGCCCGCTCCTGA Protein sequence : MGSRPPSHGFGTRAIHAGQSPDPSTGAIMTPVYMTSTYVQSTPGEHKGFEYSRTQNPTRSALEANLAALEGARHGLAFAS GLAATSTALQLLSAGDHVVACDDLYGGTYRLFDKVYRRFGLSFDYVDPSAGPSAVEAALTDATRMVWLETPTNPMLKLCD IAAVAELCKRRGLLLAVDNTFLTPFNQNPLALGADLVCHSTTKYLNGHSDTVGGALITDNDELHEKLAFLQNAVGAVPSP MDSFLVMRGLKTLHVRMERHERNARALAEWLVGHEQVERVIYPGLESHPQHELAKRQQRGFGGMISFDLRGGEPAARRFL ETCELFSLAESLGGVESLVEHPAIMTHASVPAERRRALGIGDGFIRLSVGIEELDDLRGDLERAFFAARS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAR0460 | YP_039909.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 1e-74 | 48 |
| SAS0418 | YP_042545.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 9e-76 | 48 |
| metB | YP_281510.1 | cystathionine beta-lyase | Not tested | Not named | Protein | 1e-50 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Hoch_6707 | YP_003271064.1 | cystathionine gamma-lyase | BAC0207 | Protein | 5e-58 | 47 |
