Gene Information

Name : Hoch_6302 (Hoch_6302)
Accession : YP_003270666.1
Strain : Haliangium ochraceum DSM 14365
Genome accession: NC_013440
Putative virulence/resistance : Resistance
Product : protein-tyrosine phosphatase, low molecular weight
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0394
EC number : -
Position : 8637855 - 8638283 bp
Length : 429 bp
Strand : -
Note : PFAM: protein-tyrosine phosphatase, low molecular weight; SMART: protein-tyrosine phosphatase, low molecular weight; KEGG: afw:Anae109_3642 protein tyrosine phosphatase

DNA sequence : 
ATGTCCGAATTCCGCTGCACTAGCCTGCTGTTTCTCTGCGTCGCCAACTCGGCGCGCTCGCAGATGGCCGAGGGCCTCGC
CCGCCACCGCTTCGGCGACGCCGTGCGCGTGCAGTCCGCGGGCTCTGCGCCGTCGCGCGTGAACCCCTTCGCCATCGCGG
CGATGGCCGAGCTTGGCATCGACCTGTCCACGCACACCTCGAAGTCGGTGCAGAGTATCGAGCCCGCCGGCATCGATCTC
GTGATCACGCTGTGCGCGGAGGAGGTCTGCCCGGTGTTCCTGGCCGGTGTAGCTCATCTGCACTGGCCGATTCAGGACCC
CGATCGCAAGCACGAGTCGCTGAGCGATGACGAGCGTCTGCATCACTTTCGCGTCGCGCGCGATCGCATCGGCGCGCGCC
TGGATGCGATCGCGGCAGAGGCGCGCTGA

Protein sequence : 
MSEFRCTSLLFLCVANSARSQMAEGLARHRFGDAVRVQSAGSAPSRVNPFAIAAMAELGIDLSTHTSKSVQSIEPAGIDL
VITLCAEEVCPVFLAGVAHLHWPIQDPDRKHESLSDDERLHHFRVARDRIGARLDAIAAEAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsC YP_252023.1 arsenate reductase Not tested SCCmec Protein 3e-14 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hoch_6302 YP_003270666.1 protein-tyrosine phosphatase, low molecular weight BAC0580 Protein 2e-14 43
Hoch_6302 YP_003270666.1 protein-tyrosine phosphatase, low molecular weight BAC0032 Protein 6e-14 43
Hoch_6302 YP_003270666.1 protein-tyrosine phosphatase, low molecular weight BAC0581 Protein 6e-19 41