|
Name : Hoch_5949 (Hoch_5949) Accession : YP_003270317.1 Strain : Haliangium ochraceum DSM 14365 Genome accession: NC_013440 Putative virulence/resistance : Virulence Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : 2.7.7.38 Position : 8148959 - 8149753 bp Length : 795 bp Strand : - Note : KEGG: tbd:Tbd_1505 3-deoxy-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase DNA sequence : ATGGAAGCGTTTCCCTTCTACGTCGTCATTCCCGCTCGCTACGGCTCCACGCGGCTGCCCGGCAAGCCGCTGCTCGAGCT GCTCGGGCGGCCCATGATCGCGCACGCCTGGGACAGCGCTCGCCGCTCCGGGGCCGAAGCCGTGCTGGTGGCGACCGACG ACGAGCGCATCCGGGCCGCGGTCGAGGGATTTGGCGGCGACGCGCTCATGACCTCGCCCGCGCACGCCTCGGGCACCGAC CGCCTGGCCGAAGTCGCGGCCGCGCGCGGCTGGGACGACGACGCCATCGTGGTCAATCTGCAGGGCGACGAGCCCTGCAT CCCGGGCTCGCTGCTGCGCGACGCGGCCCGCGCGCTGCACCAGCACCCCGAGGCCGGCATCGCCACCCTGGCCACGCCCA TCCGCGAGCCCGCCGACGTCTTCGACGAGAACGTGGTCAAGGTGGTCTTCGACGAGTCCGGCATGGCCGGCTACTTCAGC CGCGCGCCCATCCCCTGGGTGCGCGGCGTGTCCGGACGCGGCGCGGCGGCCGCTGCCGAGCTGCCGGCCGAGCTCGACTT CTGGCGGCACATCGGCATCTACGCCTACCGCGTCGGCACCCTGCGCCGCCTGGCCAGCGCCGACAGCCGCGCCATCGAGC GCGCCGAGTCGCTCGAGCAATTGCGCGCGTTGGCGCTCGGCATCCGCATCCACGTCTCGGCGCTCGAGACGCCGCCCGGA CACGGCGTCGACACCCCGGACGACATCCCCCGGGTCGAGCGCGCGCTGGCCGCCATGCAGGAGCAGCAGGCGTGA Protein sequence : MEAFPFYVVIPARYGSTRLPGKPLLELLGRPMIAHAWDSARRSGAEAVLVATDDERIRAAVEGFGGDALMTSPAHASGTD RLAEVAAARGWDDDAIVVNLQGDEPCIPGSLLRDAARALHQHPEAGIATLATPIREPADVFDENVVKVVFDESGMAGYFS RAPIPWVRGVSGRGAAAAAELPAELDFWRHIGIYAYRVGTLRRLASADSRAIERAESLEQLRALALGIRIHVSALETPPG HGVDTPDDIPRVERALAAMQEQQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 3e-34 | 42 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 2e-34 | 42 |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 2e-34 | 42 |
