Gene Information

Name : Hoch_5924 (Hoch_5924)
Accession : YP_003270292.1
Strain : Haliangium ochraceum DSM 14365
Genome accession: NC_013440
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 8115083 - 8117725 bp
Length : 2643 bp
Strand : +
Note : KEGG: mxa:MXAN_5092 ATP-dependent chaperone protein ClpB; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA; Clp ATPase-like; ATPase AAA; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: ATPase AAA

DNA sequence :
ATGACACGCTACAATTCTCACGGTCGTGGCGTGAGCTACGACAAACTCACTGTCAAAGCCACCGAAGCCGTCACGCAAGC
GCGCGACATCGCTATCCAAAAGCATCATGCACAGGTCTATCCCGTGCATCTACTGGCCGCTCTCCTGGCTCAGTCCGAGG
GACTCGCTCCCCGTCTCCTGGGCAAGGTCGGCGCCGATCTCTCCGCCCTGCAGCAGAGCCTCGAGCGCAGCTTCGAGAAG
CTGCCTCGCGCCCAGGGCGCGGCCATCGACGTCAGCATGTCCCGCGAGTTCAAAGAGCTCTGGGAAGGTGCCGCGAAAGA
GGCCGAGGTCTTCAAAGACGAGTACCTGTCGACCGAGCACTTCGTGCTCGCGATGGTCAACGCCCAGAGCGCGGCCGGCG
ACGCGCTGCGCGCCTCGGGCGTGGATCACGACGGGCTGATGAAGGCCCTGGGCGAGATCCGCGGCAGCCAGCGCATCGTC
GATCAGGACCCCGAAGGCAAGTACGAGGCCCTCGACAAGTACACGCGCGACCTCACGCGGCTCGCCGGCCAGGGCAAGCT
CGACCCGGTGATCGGCCGCGACGAGGAGACCCGCCGGGCCATGCAGGTGCTCAGCCGGCGCACCAAGAACAACCCGGTGC
TGGTCGGCCCCGCCGGCGTCGGCAAGACCGCCGTGGTCGAGGGCATCGCCGGGCGCATCGCCGAGGCCGACTGCCCCGAG
TCGCTGCGCGACAAGCGCATCCTGTCGCTCGATCTCGGCGCGCTGATCGCGGGCGCCAAGTACCGGGGCGAGTTCGAGGA
CCGCCTCAAGGCGGTGCTCAAGGAGATCTCCGACGCCCAGGGCAGCATCATCCTGTTCATCGACGAGCTGCACACCCTGG
TCGGCGCGGGCGCGGCCGAGGGCGCCGTGGACGCGGCCAATATGCTCAAGCCGGCCCTGGCCCGCGGCGAGCTGCGCTGC
ATCGGCGCCACCACGCTCGACGAGTACCGCAAGTACATCGAAAAGGACAAAGCCCTCGAGCGCCGCTTCCAACCGGTGTT
CGTGGACGAGCCCTCGGTGGTCGACACCATCGCCATCCTGCGCGGTCTCAAGGAGCGCTACGAGGTGCACCACGGCATCC
GCATCCTCGACGCGGCCCTGGTCGCGGCGGCGCGGCTGTCCAATCGCTACATCCCGGCCCGGCAACTGCCGGACAAGGCC
ATCGATCTCATCGACGAGGCCGCCTCGCGGCTCAAGATGGAGATCGAGTCGATGCCCGAGCCAATCGATCAGGTCAACCG
CCGCATCGCCACGCTCGAGGTCGAGCGCGCCGCGCTCAAGATCGAGAAGGACCGCCGCTCCAAGCAGCGCCTGCCCGAGG
TCGAGCGCGAGCTGGCCGAGCTGCGCGAGCAGATGTCCACGCTCAAAGCCCAGTGGCAGCGCGAGCGCGAGCTGATCGAG
GCCGTGCACCAGGCGCAGGGCGAGCTCGAGAGCGCGCGCACCGAGGCCGACAAGGCCCAGCGCACGGGTGACTTCGCCCG
CGCCTCGGAGCTGCGCTACGGTCGCATCCCCGAGCTCGAGCAGCAGATGGAGCAGAACCGCGCCTCGCTCGACGAGGCCC
AGGCCGGCGGCGGCTTCCTGCGCGAGGAGGTCACCGAAGACGACATCGCCGGCGTGGTGTCCAAGTGGACGGGTATCCCG
GTCGAGAAGATGCTCGAGGGCGAGATCGAACGCCTCAGCAGCATGGAGGATCGCCTGCGCGATCGCGTCATCGGTCAGGA
TCCCGCACTCGCGGCGGTGTCCGCGGCCGTGCGCCGGGCCCGCGCCGGGCTCCAGGACCCCAACCGGCCCATCGGCTCGT
TCCTGTTCCTCGGCCCCACGGGCGTGGGCAAGACCGAGCTGGCCCGCTCGCTCGCCGACTTCCTGTTCGACGACGAGCAC
GCCATGGTCCGCATCGACATGTCCGAATACCAGGAGAAGCACTCGGTCTCGCGCCTGGTCGGCGCCCCTCCGGGATACGT
CGGCTACGACGAGGGCGGTCAGCTCACCGAAGCGGTGCGCCGCCGGCCCTACGCCGTGGTCTTGCTCGACGAGGTCGAAA
AAGCCCACCCCGACGTGTGGAGCATCCTCCTGCAGGTGCTCGACGATGGTCGCCTCACCGACGGCCAGGGTCGCACCGTG
GACTTCCGCAACACCGTGCTCATCCTGACCTCGAACGTGGGCTCGCAGCACCTGCTGCAGCTCGGCGCCGACAACCGGAC
CGAGATCGAGCAGCGCGTCGAGGCCGAGCTGGCCAAGACCTTCCGACCGGAGTTTCTCAACCGCATCGACGAGATCATCT
TCTTCAACCCCCTCGAGCGCGGCGAACTCGCGCGCATCATCGACATCCAACTCGGCCGCTTCCACACCCTGCTGGCCGAT
CGCGGACTCGAACTCGAGGTGACGCCCGAGGCGAAAGCACTCATCGCCGAAAGGGGGTATGATCCCACGTATGGCGCGCG
ACCGCTCAAGCGCAGCATTCAGAAGAACCTGATCGATCCACTGGCCAACGCGCTGATCGCGGGTCGGTTCCCGGCCGGCT
CACGCATCGTCGCATCCGTGGACGAAGACAATGACTGCATCGCGTTCGAGCACAGCGAGCAAGCTGAAGGGGAAGCCGCA
TGA

Protein sequence :
MTRYNSHGRGVSYDKLTVKATEAVTQARDIAIQKHHAQVYPVHLLAALLAQSEGLAPRLLGKVGADLSALQQSLERSFEK
LPRAQGAAIDVSMSREFKELWEGAAKEAEVFKDEYLSTEHFVLAMVNAQSAAGDALRASGVDHDGLMKALGEIRGSQRIV
DQDPEGKYEALDKYTRDLTRLAGQGKLDPVIGRDEETRRAMQVLSRRTKNNPVLVGPAGVGKTAVVEGIAGRIAEADCPE
SLRDKRILSLDLGALIAGAKYRGEFEDRLKAVLKEISDAQGSIILFIDELHTLVGAGAAEGAVDAANMLKPALARGELRC
IGATTLDEYRKYIEKDKALERRFQPVFVDEPSVVDTIAILRGLKERYEVHHGIRILDAALVAAARLSNRYIPARQLPDKA
IDLIDEAASRLKMEIESMPEPIDQVNRRIATLEVERAALKIEKDRRSKQRLPEVERELAELREQMSTLKAQWQRERELIE
AVHQAQGELESARTEADKAQRTGDFARASELRYGRIPELEQQMEQNRASLDEAQAGGGFLREEVTEDDIAGVVSKWTGIP
VEKMLEGEIERLSSMEDRLRDRVIGQDPALAAVSAAVRRARAGLQDPNRPIGSFLFLGPTGVGKTELARSLADFLFDDEH
AMVRIDMSEYQEKHSVSRLVGAPPGYVGYDEGGQLTEAVRRRPYAVVLLDEVEKAHPDVWSILLQVLDDGRLTDGQGRTV
DFRNTVLILTSNVGSQHLLQLGADNRTEIEQRVEAELAKTFRPEFLNRIDEIIFFNPLERGELARIIDIQLGRFHTLLAD
RGLELEVTPEAKALIAERGYDPTYGARPLKRSIQKNLIDPLANALIAGRFPAGSRIVASVDEDNDCIAFEHSEQAEGEAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 1e-101 44
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 1e-103 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 9e-104 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hoch_5924 YP_003270292.1 ATP-dependent chaperone ClpB VFG2076 Protein 2e-121 45