Gene Information

Name : Hoch_5512 (Hoch_5512)
Accession : YP_003269888.1
Strain : Haliangium ochraceum DSM 14365
Genome accession: NC_013440
Putative virulence/resistance : Unknown
Product : argininosuccinate lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0165
EC number : -
Position : 7559080 - 7560468 bp
Length : 1389 bp
Strand : +
Note : TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: ppd:Ppro_3168 argininosuccinate lyase

DNA sequence :
ATGACAGACGCAAAAGGCGCACGGGGCCGCCGCTTCGCCGGCTCGCTCGCACCGGACGCCACCGAGGTCAACGCCTCGGT
GGGCTTCGACTGGCGGCTCTTGCCGCACGACGTGGCCGGCTCGCTCGCCCACGCCCGCATGTTGGCCAAGCAGGGCATCA
TCTCCGCCGACGACCTGGCGCGCATCGAGGCCGGCATCCAGCGCGCGGCCGAGCGCCTGCAGAGCGGCGAGGTGCCCTGG
GATCCCGCGCTCGAGGACGTGCACATGAACGTCGAGGCGCGGCTCATCGAGGAGGTCGGCGAGCCCGGCCGCCGCCTGCA
CACGGCGCGCAGCCGCAACGATCAAGTGGCCACGGATCTGCGCCTGTACGCGCGCGCGCAGGCCGCGGTGCTGATCGAGC
GCATCGACGAGCTGCGCCGCGCCCTGGCCGACAAGGCCGCGTGCTACCTCGACGTGTTCATGCCCGGCTACACCCACCTG
CAGCGCGCCCAGCCGGTGCGCCTGGCCCATCACCTGCTGGCCTACGACGCCATGCTGCGCCGCGATCGCGGGCGCATCGA
GGACGCGTCCGCGCGCGCCGGTGAGTGTCCGCTCGGCGCCGGCGCCCTGGCCGCGACCACCTTCCCCATCGACCGCGAGG
CCACGGCCCGCGAGCTGGGCTTCACCGGGGTCACGCGCAACAGCCTCGACGCGGTCGGCGATCGCGACTTCGCGGTCGAG
CTGGTGGCCGCGATCGCGCTGTGCCAGGTGCACCTGTCGCGCCTGGGCGAGGAGATCGTGCTGTGGCTGTCGCAGGAGTT
TGGCTTCGCGCGCCTCGACGAGTCGTACTGCTCGGGCTCGAGCATCATGCCGCAGAAGATGAACCCCGACCTGGCCGAGC
TCATCCGCGGGAAAACCGGACGCGTGGTCGGTCACTGGGTGTCGCTGGTGACCGTGCTCAAGGGATTGCCGCTGGCTTAT
AACAAGGATCTCCAGGAGAGCCAGGAGCCGCTCTTCGACGCGGTCGAGACCCTCGACGCCAGCCTGCGCGTGGCCCGCGG
CATGATCGACAACCTGGTGTTCGACGAGCAGCGCCTGGCGCGCGCCGTCACCCAGGGCTTTTTGCTGGCCACCGAGGTCG
CCGACTACCTGGTCACCAAGGGCATGTCCTTCCGCGAGGGCCACCACATCGCCGGCGCGCTGGTGCGCACGGCGCTCGAG
CGCCAGGTCGGTCTCGAGGCGCTGCCGCTCGAGGTCTTTCGCGGCGAGAGCGAGCTGTTCGAGGACGATATCTTCTCGTG
GCTGGAAGTCGGACGCGCGGTCGATCGTCGCGATGTCGTCGGCGGCCCGGCGCGCTCGCAGATCGAAGCCGAGCTGGTGC
GCATCCGCGCCGAGCTGGAGACGCGATGA

Protein sequence :
MTDAKGARGRRFAGSLAPDATEVNASVGFDWRLLPHDVAGSLAHARMLAKQGIISADDLARIEAGIQRAAERLQSGEVPW
DPALEDVHMNVEARLIEEVGEPGRRLHTARSRNDQVATDLRLYARAQAAVLIERIDELRRALADKAACYLDVFMPGYTHL
QRAQPVRLAHHLLAYDAMLRRDRGRIEDASARAGECPLGAGALAATTFPIDREATARELGFTGVTRNSLDAVGDRDFAVE
LVAAIALCQVHLSRLGEEIVLWLSQEFGFARLDESYCSGSSIMPQKMNPDLAELIRGKTGRVVGHWVSLVTVLKGLPLAY
NKDLQESQEPLFDAVETLDASLRVARGMIDNLVFDEQRLARAVTQGFLLATEVADYLVTKGMSFREGHHIAGALVRTALE
RQVGLEALPLEVFRGESELFEDDIFSWLEVGRAVDRRDVVGGPARSQIEAELVRIRAELETR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00328 YP_008211654.1 Argininosuccinate lyase Not tested AbaR26 Protein 1e-91 47
BJAB07104_00324 YP_008207789.1 Argininosuccinate lyase Not tested AbaR25 Protein 1e-91 47