Gene Information

Name : Hoch_5222 (Hoch_5222)
Accession : YP_003269601.1
Strain : Haliangium ochraceum DSM 14365
Genome accession: NC_013440
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 7177138 - 7178841 bp
Length : 1704 bp
Strand : +
Note : TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; KEGG: mxa:MXAN_4235 thiamine biosynthesis protein ThiC

DNA sequence :
ATGAGTACAGGCAACGGCGCCCATGGCAATGGCGCGAACGGCAACGGCGCCAACGACAAGCACAGCCTGGCCCAGGTCGG
CCCGGCGCCGGTGGACGGCTTGACGCCGATCGCCGGCTTCCCCAGCTCCGAGAAGGTCTATCTCGAGCGCGACGGTGTGC
GGGTGCCGGTGCGGCGCATCGAGCTCAGCGGCGGCGAGCCCGCGCTCGATGTCTACGACACCTCGGGCCCCGAGAACTGC
GATCTCCATCGCGGCCTGCCCAAGCTGCGGCAGCCGTGGATCGACGCGCGCATAGCCGAGGACGACGGCAACCGCACGCA
GATGCACTACGCGCGCCGCGGCCTCATCACCGAGGAGATGAAGTTCATCGCCCTGCGCGAGGGACTCGCGGCCGAGTTCG
TGCGCGACGAGGTCGCCAGCGGCCGCGCCATCATCCCGGCCAACATCAAGCACCCGGAGAGCGAGCCGATGATCATCGGC
AAGAACTTCCTGGTGAAGATCAACGCCAACATCGGCAACTCGGCCGTGTCCTCGTCGATCGGCGAGGAGGTCGACAAGCT
GCGCTGGGCGACAAAATGGGGCGCGGACACCATCATGGACCTGTCCACCGGCAAGCAGATCCACGAGACCCGCGAGTGGA
TTCTGCGCAACGCGCCGGTGCCCGTGGGCACGGTGCCCATCTACCAGGCGCTGGAGAAGGTCGGTGGCGACCCCGAAAAG
CTCAACATCGACGTGTTTATGGACACCCTGGTCGAACAAGCCGAGCAGGGCGTCGACTACTTCACCATCCACGCCGGCGT
GCTGCTGCGCTACGTGCCGCTCACGGCCAATCGCGTCACCGGCATCGTCTCGCGCGGCGGCTCCATCCTGGCCAAGTGGT
GCATGGCCCACCACCGCGAGAACTTCCTGTACACCGAGTTCGAGCGCATCTGCGAGCTGATGAAGAAGTACGACGTGGCC
TTTAGCCTGGGCGACGGCCTGCGTCCGGGCTCGATCGCCGACGCCAACGACGCCGCCCAGCTCGGCGAACTCGAGACCCT
GGGCGAGCTCACCGAGCTGGCCTGGAAGCACGACGTGCAGGTGATGATCGAGGGCCCCGGCCACGTGCCCATGCACAAGA
TCAAAGAGAACGTCGAGCTGCAAGAGAAGCTGTGCCACGAGGCGCCCTTCTACACCCTGGGGCCGCTCACCACCGATATC
GCTCCCGGCTACGATCACATCACCTCGGCCATCGGCGCGGCCATGATCGGTTGGTTCGGCACCGCCATGCTGTGCTACGT
GACGCCCAAGGAGCACCTCGGCCTGCCCGATCGCGACGACGTCAAAGCCGGCGTCATCGCGTACAAGATCGCGGCCCACG
CCGCCGACCTGGCCAAGGGCCACCCGGGCGCACAGAAGCGCGACGACGCGCTGTCCAAAGCGCGCTTCGAGTTCCGCTGG
GACGACCAGTTCAACCTCTCGCTCGACCCCGACACCGCGCGCGCCTTCCACGACCAGACCCTGCCAGCGCCCGCGGCCAA
AGGCGCGCACTTCTGCTCCATGTGCGGCCCCAAGTTCTGCTCGATGAAGATCACCCAGGACGTGCGCGACTTCGCCGTCG
CCCAGGGCGTGAGCGAGGACGAGGCCGTGCGCTCCGGCATGGAGCACAAAGCCGCCGAGTTCCGCGAGCAGGGCAAGCGC
CTGTACGCGGAAACCGAGAGCTGA

Protein sequence :
MSTGNGAHGNGANGNGANDKHSLAQVGPAPVDGLTPIAGFPSSEKVYLERDGVRVPVRRIELSGGEPALDVYDTSGPENC
DLHRGLPKLRQPWIDARIAEDDGNRTQMHYARRGLITEEMKFIALREGLAAEFVRDEVASGRAIIPANIKHPESEPMIIG
KNFLVKINANIGNSAVSSSIGEEVDKLRWATKWGADTIMDLSTGKQIHETREWILRNAPVPVGTVPIYQALEKVGGDPEK
LNIDVFMDTLVEQAEQGVDYFTIHAGVLLRYVPLTANRVTGIVSRGGSILAKWCMAHHRENFLYTEFERICELMKKYDVA
FSLGDGLRPGSIADANDAAQLGELETLGELTELAWKHDVQVMIEGPGHVPMHKIKENVELQEKLCHEAPFYTLGPLTTDI
APGYDHITSAIGAAMIGWFGTAMLCYVTPKEHLGLPDRDDVKAGVIAYKIAAHAADLAKGHPGAQKRDDALSKARFEFRW
DDQFNLSLDPDTARAFHDQTLPAPAAKGAHFCSMCGPKFCSMKITQDVRDFAVAQGVSEDEAVRSGMEHKAAEFREQGKR
LYAETES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 4e-176 65
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 4e-176 65
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 4e-167 62