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Name : Hoch_5211 (Hoch_5211) Accession : YP_003269590.1 Strain : Haliangium ochraceum DSM 14365 Genome accession: NC_013440 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 7165422 - 7166711 bp Length : 1290 bp Strand : - Note : TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase ; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: tgr:Tgr7_2112 NDP-sugar DNA sequence : ATGTCGCAATCGACACAGGAGACCATCGCCGTCATCGGTCTGGGTTACGTCGGCCTGCCCGTGGCACTGAGCTTCGCCAA GAAGTACCCGACCATTGGCTTCGACATCAGCGAGCGCCGCATCAAGGAGTTGCGCGAAGGCCTGGACGTCACCGCCGAGG TCGAGAGCGAGGACCTCACGTCCTCGAAGATCAAATTCTCGGCGGACCCCGCGGACCTGGCCGAGGCGACCTTCATCATC GTCGCCGTGCCCACGCCCATCGACAAGAACAACCGCCCGGACCTAACTCCCGTGATCGGCGCCTCGCGCACGGTCGGCAA GAATCTGCGCAAGGGCGCGGTCGTGGTCTACGAATCGACCGTGTACCCGGGCGTGACCGAGGAGGAGTGCGGGCCGGTGC TCGAGCAGGAGTCGGGCCTCAAGGCCGGTGAGGACTTCTTCCTCGGCTACTCGCCCGAGCGCATCAACCCGGGCGACAAG GAGCACACCTTCGAGCGCATCGTCAAAGTGGTGTCCGGCCAGGACGCGGCCACTCTCGACCGGGTGTCCGAGGTCTACTC CTCGGTGGTCACCGCCGGCGTGCACCGGGCCTCGACCATCAAGGTCGCCGAGGCCGCCAAGGTCATCGAGAACACCCAGC GCGACCTCAACATCGCGCTGATGAACGAGCTGGCCCTGATCTTCGATCGCGTCGGCATCCGCACCAAGGACGTGCTCGAG GCCGCCGGCACCAAGTGGAACTTCCTCAAGTTCACGCCCGGCCTGGTCGGCGGACACTGCATCGGCGTCGACCCCTACTA CCTCACCACCAAGGCCGAGGAGCTGGGCTACCAGCCCGAGGTCATCCTCGCCGGCCGGCGCATCAACAACAACATCGGCG CGTTCGTGGCCCAGAAGGCGCTCAAGCTGATGGCCGCGGGCAAGGTGCCCCTGCACCTGGCCAAGGTCGGCATCTTTGGC CTCACCTTCAAGGAGAACGTGCCCGACCTGCGCAACAGCAAGGTGCCCGACATCGTCCACGAGCTGCGCCAGTTCGGCGT GGTGCCGCTGGTTCACGATCCCATGGGCGACTCCGAGGAGGCCGAGCACGAGTACGGCATCAAGCTCTCGCCCTGGGAGG ACATGAGCGACCTAAACGCCGCCATCTTCGCGGTCTCGCACAGCTTCTACCTCGACCAGGGCATCGAGGCGCTGCTCGCG CGCGTGCGTCCGGGCGGGGCCTTCGTCGACGTCAAGTCGGCCTTTCAGCCCAGCGATATCTCCGACAAATACGCCTACTG GAGCCTGTAG Protein sequence : MSQSTQETIAVIGLGYVGLPVALSFAKKYPTIGFDISERRIKELREGLDVTAEVESEDLTSSKIKFSADPADLAEATFII VAVPTPIDKNNRPDLTPVIGASRTVGKNLRKGAVVVYESTVYPGVTEEECGPVLEQESGLKAGEDFFLGYSPERINPGDK EHTFERIVKVVSGQDAATLDRVSEVYSSVVTAGVHRASTIKVAEAAKVIENTQRDLNIALMNELALIFDRVGIRTKDVLE AAGTKWNFLKFTPGLVGGHCIGVDPYYLTTKAEELGYQPEVILAGRRINNNIGAFVAQKALKLMAAGKVPLHLAKVGIFG LTFKENVPDLRNSKVPDIVHELRQFGVVPLVHDPMGDSEEAEHEYGIKLSPWEDMSDLNAAIFAVSHSFYLDQGIEALLA RVRPGGAFVDVKSAFQPSDISDKYAYWSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-113 | 56 |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-93 | 52 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 2e-93 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Hoch_5211 | YP_003269590.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 9e-94 | 52 |
