Gene Information

Name : Hoch_5030 (Hoch_5030)
Accession : YP_003269411.1
Strain : Haliangium ochraceum DSM 14365
Genome accession: NC_013440
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 6940036 - 6940782 bp
Length : 747 bp
Strand : +
Note : PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: afw:Anae109_3601 short-chain dehydrogenase/reductase SDR

DNA sequence :
ATGCTGCGCAATCGTATCGCCCTCGTCACCGGCGCCTCCCGCGGAATCGGCGCGGCCACGGCCCGGCTCTTCGCCGCGCA
CGGCGCCGCGGTAGCCGTCAATTACCATCGCAATCAGGCCGCCGCCGAGGCCGTGGTCGAGGACATCGAAGCCGCCGGCG
GGCGCGCGCTCGCCGTGGGCGCCGACGTCACCGACGAGGCCCAGGTCGAGGCCATGGTCGAGCGCGTACGCGACCAGCTC
GGCGCCGTCGATCTGCTGGTGCTCAACGCCGGCGTCCCGCCGCACACCGCGCCGCTGGTCAGCGACCGCTGGCGCGACTT
CGAGCGCAAGCTCACGCTCGAGCTCAAGGCCGCCTTCCTCACCACCCAGGCCGTGCTCCCGGACATGCTCGAGGCCGAAC
GCGGCTGCATCGTCGCGGTCTCGAGCACGGTCGCCCGCCACGCCACGCCCGCGCTCGGTGCCCACGCCGCGTCCAAAGCC
GCGCTCGAATCCTACGCCCGCACCCTGGCGGTGGAGCTCGGCCCCCGCGGCGTGCGCGTCAACGTGGTCGCCCCCGGCGT
CATCCGCACCGACGCCACCAAGCACATCCCCGAATCGCACCAGCGCGCCATCGCCAAGATGACGCCCCTGCGCCGCAGCG
GCACCCCCGAGGACGTCGCCGGCGCCATCCTCATGCTCGCCGCCGATCACACCGGCTTCGTCACCGGCGCCTACGTGCAG
GTCGACGGCGGCCTGCAGCAACGCTGA

Protein sequence :
MLRNRIALVTGASRGIGAATARLFAAHGAAVAVNYHRNQAAAEAVVEDIEAAGGRALAVGADVTDEAQVEAMVERVRDQL
GAVDLLVLNAGVPPHTAPLVSDRWRDFERKLTLELKAAFLTTQAVLPDMLEAERGCIVAVSSTVARHATPALGAHAASKA
ALESYARTLAVELGPRGVRVNVVAPGVIRTDATKHIPESHQRAIAKMTPLRRSGTPEDVAGAILMLAADHTGFVTGAYVQ
VDGGLQQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01499.1 2-deoxy-D-gluconate 3-dehydrogenase Not tested PAGI-1 Protein 2e-08 42