Gene Information

Name : Hoch_4507 (Hoch_4507)
Accession : YP_003268893.1
Strain : Haliangium ochraceum DSM 14365
Genome accession: NC_013440
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 6157157 - 6158521 bp
Length : 1365 bp
Strand : +
Note : KEGG: gur:Gura_0928 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: ATPase AAA

DNA sequence :
ATGACCAAGCGAATCCTGCCCAGCAACGTCGACGCCGAGGCCTCGGTGCTCGGCGGAATCCTGCTCCGCAACGACGTCCT
CAGTCGCCTCGATACGCTCGAGGAGGCGGACTTCTATGACCCGCGCCACGCCGCCATCTTCGCGGCCATGCAGCGGCTCG
AGACCCAGACCAAGCCCATCGACGAGGTCACCCTTGAGGACGAGCTGCAAAAGGTCGCCAAGCTCGAGGCCGTCGGCGGG
CTGGCCTTCCTCTCCGAGCTGGCCCTGCGCGTGCCCACGGCCGACAACGTCGTGCACTACGCCCAGATCGTCCAGGACAA
GCACGCGGCGCGGCGCCTGATGCTGGCGGCCTCGGAGATCGCGGCCCGCGGCTACGAGGACCAGGGCGACGTCAACGACT
ACCTCGACGACGCCGAGTCCAAGATCTTCGAGGTCACGCAGCGCAAGCAGCGCACCGGCCCCGAGCACATCAAGGGACTG
ATCAAAAGCGTCTTCAAGTCGCTCGACGAGCGCTACTCGGCCCCCGAAGGCGTCACCGGCGTGCCCACCGGCTTCGCCGA
GCTCGACAACCGCACCGCCGGTCTGCAGCCCACCGAACTCATCATCCTCGCCGCCCGCCCGGCCATGGGCAAGACCTCGT
TCGCCCTGTCCCTGGCCCAGAACTGCGCCGATCACGAGATCGGCGGCGGCTGGCCGGTGCTGGTGTTCTCGCTCGAGATG
TCCTCGGCCCAGCTCGCCGAACGTATGCTGTGCTCCGAGGCGCGCGTGGACTCCATCAACCTGCGCCGCGGCCGACTCGA
GCGCCAGGACATGACCAACCTCACCTACGCCGCCGGCAAGCTGGCCAAGTCGCCGATCATGATCGACGACACCCCGGCGC
TATCACTGCGCGAGCTGCGCGCACGCGCGCGCCGCTTCGTGGCCGACAAGGAGCTGTTCCGCGAGCACAAGTTCGGCCTC
ATCGTGGTCGATTACCTGCAGCTCATGCGCGGCAGCCAGCAGGCCCGCTCGGCCAGCCGCGAGCAGGAGATCTCCGAAAT
TTCGCGTGGACTCAAGGCCCTGGCCAAGGAGATCAACTGTCCGGTGCTGGCGCTATCGCAGCTCAACCGCAGCCTGGAAT
CGCGTCAGGACAAACGCCCGCAGCTGTCCGACTTGCGAGAGTCGGGCGCAATCGAGCAGGATGCAGACGTCATCATGTTC
ATCTACCGGGACGTCATCTACAACGAGAACACCGAAGAGCCGAATGTGGCCGAGGTGATTCTCGGCAAGAACCGCCACGG
CGCCACCGGAACCGTGAAGACCCAGTTCGAGGGACGCTTCACACGCTTCGAGAACCTGTCGGAACGACAGGACGACTCGT
ACTGA

Protein sequence :
MTKRILPSNVDAEASVLGGILLRNDVLSRLDTLEEADFYDPRHAAIFAAMQRLETQTKPIDEVTLEDELQKVAKLEAVGG
LAFLSELALRVPTADNVVHYAQIVQDKHAARRLMLAASEIAARGYEDQGDVNDYLDDAESKIFEVTQRKQRTGPEHIKGL
IKSVFKSLDERYSAPEGVTGVPTGFAELDNRTAGLQPTELIILAARPAMGKTSFALSLAQNCADHEIGGGWPVLVFSLEM
SSAQLAERMLCSEARVDSINLRRGRLERQDMTNLTYAAGKLAKSPIMIDDTPALSLRELRARARRFVADKELFREHKFGL
IVVDYLQLMRGSQQARSASREQEISEISRGLKALAKEINCPVLALSQLNRSLESRQDKRPQLSDLRESGAIEQDADVIMF
IYRDVIYNENTEEPNVAEVILGKNRHGATGTVKTQFEGRFTRFENLSERQDDSY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 3e-71 45
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 3e-71 45
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 4e-77 44
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 1e-77 43
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 6e-78 43
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 1e-70 42
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 1e-66 42
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 8e-75 41