Gene Information

Name : Hoch_0324 (Hoch_0324)
Accession : YP_003264858.1
Strain : Haliangium ochraceum DSM 14365
Genome accession: NC_013440
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 459959 - 460666 bp
Length : 708 bp
Strand : +
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: maq:Maqu_1013 ABC transporter

DNA sequence : 
ATGCCAGACGCCATCCTCGAAGCGCGCGCGATCACCAAGACCTACCGCATGGGCGAGGTCGACGTGCACGCCCTGCGCGG
CGTCGACACCGCGCTCTACGCCGGCGAGCTGCTGGTGTTGCTCGGCGCCTCGGGCAGCGGTAAATCCACCCTGCTCAACA
TCCTGGGCGCGCTCGACGTGCCCACCACCGGCGCGGTCGACTTCGGCGAGCTGGCGCTCACGGGCGCCGACGAGGATGAG
CTCACGCAGTTCCGCCGCGACCACGTCGGCTTCGTGTTCCAGTTCTACAACCTCATCCCCAGCCTGACCGCGCGCGAGAA
CGTCGCGCTGGTGACCGACATCGCGCGCGACCCGCTCACGCCCGAGGAGGCGCTGCACATGGTCGGCCTGGGCGAGCGCG
TCGATCACTTCCCCGGCCAGCTCTCGGGCGGCGAGCAGCAGCGCGTGGCCATCGCGCGCGCCGTGGCCAAGCAGCCCACG
CTGCTGCTGTGCGACGAGCCCACGGGCGCGCTCGACTCGCGCACCGGCGTGCTCATCCTCGAGGTGCTCGAGCGCATCAA
CCGCGAGCTGGGCACGACCACGGCCGTCATCACCCACAACGCCCCCATCGCGGCCATGGCCGACCGCGTGCTCACCCTGG
CCGACGGCCTGGTGGTGAGCGAGGAGCGCAACGCCGACAAAGCGCGGCCGCGAGACCTGCAATGGTGA

Protein sequence : 
MPDAILEARAITKTYRMGEVDVHALRGVDTALYAGELLVLLGASGSGKSTLLNILGALDVPTTGAVDFGELALTGADEDE
LTQFRRDHVGFVFQFYNLIPSLTARENVALVTDIARDPLTPEEALHMVGLGERVDHFPGQLSGGEQQRVAIARAVAKQPT
LLLCDEPTGALDSRTGVLILEVLERINRELGTTTAVITHNAPIAAMADRVLTLADGLVVSEERNADKARPRDLQW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-31 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-32 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hoch_0324 YP_003264858.1 ABC transporter NC_012469.1.7685735. Protein 6e-51 48
Hoch_0324 YP_003264858.1 ABC transporter NC_008702.1.4606598. Protein 6e-32 46
Hoch_0324 YP_003264858.1 ABC transporter CP001581.1.gene798.p Protein 2e-37 43
Hoch_0324 YP_003264858.1 ABC transporter NC_012469.1.7686878. Protein 8e-37 42