Gene Information

Name : Hoch_2905 (Hoch_2905)
Accession : YP_003267318.1
Strain : Haliangium ochraceum DSM 14365
Genome accession: NC_013440
Putative virulence/resistance : Unknown
Product : transposase mutator type
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3328
EC number : -
Position : 3958103 - 3959410 bp
Length : 1308 bp
Strand : +
Note : PFAM: transposase mutator type; MULE transposase, conserved domain; KEGG: xcv:XCVc0009 transposase mutator family protein

DNA sequence :
ATGACCCGTACAAAGACGCAGAAAAATTCGAAGAACGACGTGTGCGAACTCAGCGAGGTGAGCGCGGTGCTGGGCGGAGA
AGAGCTGAGCGCGAAGCAGAAGCGCGCCAAGGCCAAGGAGATGGTGGGCGCGCTGATGGGCGACTACAAGGCCGAGGAGC
TGCTGAGCCAAGGAGGCCTGATGCAGCAACTGGTGGGCGCGGTGGTGGAGCGCGCGCTGGAGGCAGAGATGACCGAACAC
CTCGGGTACGCGAAGGGGGAGCGGTCCGGCGGAGGGGGCAACAGTCGAAACGGCACCAGTCGCAAGATGCTCAAGGGCGA
CAACGGAGAATTCCCGATCCAGGTGCCGCGAGACCGGGCGGGGAGCTTCGCGCCGCAGCTGGTGAAGAAGCATCAGACGC
GGCTGCCGGGCTTCGATGACAAGATCATCGCGATGTACGCACGCGGGATGAGCGTGCGCGACATCCAGGCTCAGCTCGAG
GAGCTGTACGGGGTGGACGTCGGCTCCGACCTGATCTCGCGAGTGACCGACAGCGTGCTGGACGAGGTCAAGGCGTGGCA
GGCCAGGCCGCTGGACCCGGTCTACCCCATCGTCTATCTCGACGCGCTGGTCGTGAAAGTGCGCGACGGCGGACTGGTCA
AGAACAAGCACGTGTACCTCGCGCTGGGCGTCAACATGCAGGGCAAGAAGGAGATCCTCGGCATGTGGCTGCAGCGCAGC
GAGGGCGCCAAGTTCTGGCATCAGGTGCTCACCGAGCTACGAAACCGCGGGCTCAAGGATATGCTGATCGTCTGTACCGA
TGGCCTCAGCGGCTTCCCTGAGGCCATCGAGGCCGTCTACCCAGAGGCCGTGCTGCAGACCTGTATCGTCCACCTGCTGC
GGGCCTCGATCCGCTACGTGACCTGGAAGGACCGTCGGGCGGTGTTGGCCGACCTCAAGCCGGTCTACACCGCGCCGACC
GAGGAGGCTGCGCTCGACGCGCTGGTCGCCTTTAATGAGCGCTGGCAGCACACCTACCCCATGATCGGCCAGAGCTGGGA
AGCCGCCTGGGAGCGCGTCATCCCCTTATTTGCCTTTCCGTCCGAAATACGGAGAGTCATCTATACGACGAACGCCATCG
AGTCCGTCAACCGCCAGATTCGCAAGGTCATCAAGACCAAGGGACACTTCCCCAACGACGACGCCGTATTCAAGATCCTC
TTTCTTGCCTTGCACAATGCTTCAAAGAAGTGGACTATGCCCATACGAGACTGGTCTCGAGCCCTTCATCAGCTCGCCAT
TCTCTTTCCCGGACGATTGTCCGTCTGA

Protein sequence :
MTRTKTQKNSKNDVCELSEVSAVLGGEELSAKQKRAKAKEMVGALMGDYKAEELLSQGGLMQQLVGAVVERALEAEMTEH
LGYAKGERSGGGGNSRNGTSRKMLKGDNGEFPIQVPRDRAGSFAPQLVKKHQTRLPGFDDKIIAMYARGMSVRDIQAQLE
ELYGVDVGSDLISRVTDSVLDEVKAWQARPLDPVYPIVYLDALVVKVRDGGLVKNKHVYLALGVNMQGKKEILGMWLQRS
EGAKFWHQVLTELRNRGLKDMLIVCTDGLSGFPEAIEAVYPEAVLQTCIVHLLRASIRYVTWKDRRAVLADLKPVYTAPT
EEAALDALVAFNERWQHTYPMIGQSWEAAWERVIPLFAFPSEIRRVIYTTNAIESVNRQIRKVIKTKGHFPNDDAVFKIL
FLALHNASKKWTMPIRDWSRALHQLAILFPGRLSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api41 CAF28515.1 is285 transposase Not tested YAPI Protein 1e-103 51
CPR_0630 YP_697957.1 ISCpe3, transposase Not tested Not named Protein 4e-91 46
tnp7109-31 YP_001800937.1 transposase for insertion sequence Not tested Not named Protein 8e-81 44
tnp7109-23 YP_001800851.1 transposase for insertion sequence Not tested Not named Protein 4e-81 42
CDHC03_2103 YP_005139146.1 transposase-like protein Not tested Not named Protein 1e-82 41