Gene Information

Name : Hoch_2838 (Hoch_2838)
Accession : YP_003267255.1
Strain : Haliangium ochraceum DSM 14365
Genome accession: NC_013440
Putative virulence/resistance : Resistance
Product : cation efflux protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1230
EC number : -
Position : 3889502 - 3890311 bp
Length : 810 bp
Strand : -
Note : KEGG: prw:PsycPRwf_0699 cation efflux protein

DNA sequence :
GTGAACCAGACAACCTTTCACATCAAGGACATGGACTGCTCGTCGGAGGAGCAGATGATCCGGATGCGCCTGGAGGGCAT
GGAAGGCATTTCCGGGCTGGAGTTCGATCTCAGCCAGCGGCGACTCGACGTCTTCCACGACGGCTCGCCCTCCACGATCG
CCGACGTCCTTGCGCCTCTGAATCTCGGTGCGCGCCAGGTGGAGCACCGAGAGGAGGTCGAGATGCCGACGGAGGATGAC
GATGCATCCAACCGTGGGCCCCTCATGTGGGCGCTCGCGATCAACTTCACACTCTTCGTCGGTGAGCTCGCCGCGGGCCT
CCTATCAGGATCGATGGGCCTGGTCGCGGACTCCTTGGACATGTTGGCCGACGCGTTCGTCTACGCGCTCAGCCTCGCCG
CTGTTGGCGGGAGCCTCGTACGCAAGCGGCGACTCGCCGCCTGGAGCGGCTACCTTCAGGGAGGGCTGGCGTTGCTCGGT
CTCGCCGAGGTCGTGCGGCGCTTCGTAGCGCCGATGGGCGCGCCGGACGTAGGGTCGATGATCGTGGTCTCCTTGGTGGC
CCTCGCTGCCAATGTGGCGACCCTGCTCATCCTGCGCCGCACCAAGCGGGGTGAGGCCCACATCGAGGCCAGCTGGATCT
TCACGTCCAACGACATCAAGGTGAACGCCCTCGTCATCCTCGCGGGACTCCTCGTCTGGTGGTCGTCGTCGCAGGTGCCC
GATCTCATCGCCGGCGGGTTGATCTTCCTGATCGTTGCGAACGGCGCTCGCCGAATCCTCGCGTTGTCGAAGGGGTCATC
GGGGAGGTGA

Protein sequence :
MNQTTFHIKDMDCSSEEQMIRMRLEGMEGISGLEFDLSQRRLDVFHDGSPSTIADVLAPLNLGARQVEHREEVEMPTEDD
DASNRGPLMWALAINFTLFVGELAAGLLSGSMGLVADSLDMLADAFVYALSLAAVGGSLVRKRRLAAWSGYLQGGLALLG
LAEVVRRFVAPMGAPDVGSMIVVSLVALAANVATLLILRRTKRGEAHIEASWIFTSNDIKVNALVILAGLLVWWSSSQVP
DLIAGGLIFLIVANGARRILALSKGSSGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
1_43 CAJ77022.1 Heavy metal detoxification protein Not tested AbaR1 Protein 2e-32 48
1_376 CAJ77095.1 Heavy metal detoxification protein Not tested AbaR1 Protein 2e-32 48
cadA ADZ05770.1 Co/Zn/Cd efflux system component Not tested AbaR11 Protein 2e-32 48
cadA AGK36654.1 Co/Zn/Cd efflux system component Not tested AbaR26 Protein 2e-32 48
ACICU_00235 YP_001844894.1 heavy metal detoxification protein Not tested AbaR20 Protein 3e-32 48
cadA ACN81030.1 Co/Zn/Cd efflux system component Not tested AbaR5 Protein 3e-32 48
cadA ACS32042.1 Co/Zn/Cd efflux system component Not tested AbaR5 Protein 3e-32 48