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Name : Hoch_2487 (Hoch_2487) Accession : YP_003266916.1 Strain : Haliangium ochraceum DSM 14365 Genome accession: NC_013440 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 3422907 - 3423347 bp Length : 441 bp Strand : + Note : TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19; KEGG: dat:HRM2_30960 RplS DNA sequence : ATGACGGCCCCAGTTACTCTCATTCAACAGATCGAAAAACGCTTCCTTCGCACTGACCCCCTGCCGGAGTTCCGGGCGGG CGACACGGTCAAAGTGTGGGTCAAGATCCGCGAGGGCCAGAAGACCCGCTCGCAGGCCTTCGAGGGCGTGTGCATCCGCC GCAGCCGCGGCGGCAACCGCGGCGCCTTCACGGTCCGCAAAATCTCGTACGGCGTGGGCGTCGAGCGTATCTTCGCCGAC AACTCGCCCAACATCGAGAAGATCGAGGTCGTCGCTCGCGGTAAGGTGCGCCAGGCGCGTCTCTACTACCTGCGCGGCCT CAGCGGCAAGGCGGCTCGTATCAAAGAGCGCGCCTTCGACAAGAATCGCGAGGTCGAGAAGAAGCCTCGTCGCAAGCGCC GCGGCAAGCGCAAGGCTGCCGCAGCAGCCGACGCTCAATAG Protein sequence : MTAPVTLIQQIEKRFLRTDPLPEFRAGDTVKVWVKIREGQKTRSQAFEGVCIRRSRGGNRGAFTVRKISYGVGVERIFAD NSPNIEKIEVVARGKVRQARLYYLRGLSGKAARIKERAFDKNREVEKKPRRKRRGKRKAAAAADAQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 1e-25 | 59 |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 5e-21 | 58 |
