Gene Information

Name : Hoch_1704 (Hoch_1704)
Accession : YP_003266147.1
Strain : Haliangium ochraceum DSM 14365
Genome accession: NC_013440
Putative virulence/resistance : Virulence
Product : urease subunit alpha
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0804
EC number : 3.5.1.5
Position : 2317309 - 2319018 bp
Length : 1710 bp
Strand : -
Note : KEGG: abo:ABO_2719 urease subunit alpha; TIGRFAM: urease, subunit alpha; PFAM: amidohydrolase; urease alpha-subunit domain protein; amidohydrolase

DNA sequence :
ATGGCCCACAACGCCAAGATCTCGCGCCGCGAATACGCGGAGAAATTCGGACCGACGGTCGGCGACCGCATCCGGCTCGC
CGACACCGAGCTGTTCATCGAGGTCGAAAAAGACCACGCCATCTACGGCGAGGAGGTCAAATTCGGCGGCGGCAAGGTGA
TCCGCGACGGCATGGGCCAGTCGCCGCGCGCGCACGCCGAGGGCGCGGTCGACACCGTCATCACCAACGCCGTGATCCTC
GACTGGTGGGGCGTGGTCAAAGCCGATATCGGCATCAAAGACGGCCTCATCGCCGCCATCGGCAAGGCCGGTAACCCCGA
CATCCAGCCCGGCGTCGACATCATCATCGGCCCCGGCACCGAGATCATCGCCGGCGAGGGTCGCATCGTCACCGCCGGCG
GCATCGACGCGCACATCCACTTCATCGCCCCGCAGCAGATCGAAGAGGCGCTGTGCTCGGGCATCACCACCATGCTCGGC
GGCGGCACCGGACCCGCGGCCGGCACCACGGCGACCACCTGCACCCCGGGCCCGTGGCACATCGAGCGCATGCTCATGGC
CGCGCCCGCGTTCCCGATGAACCTGGGCTTCTTCGGCAAGGGCAACACCTCGCAGCCGGCCGCCCTGGTCGAGCAGATCG
AGGCCGGCGCCTGCGGCCTCAAGCTGCACGAGGACTGGGGCTCGACCCCGGCCGCGATCCGCAACTGCCTCAGCGTCGCC
GAGCAGTACGACGTCCAGGTCGCCCTGCACGCCGACACCCTCAACGAGGCCGGCTTCGTCGAGGACACGCGCGCCGCCTT
CGAGGACCGCACCGTGCACGTGTTCCACACCGAGGGCGCCGGCGGCGGTCACGCGCCCGACGTGATCCGTCTGGTCGGCG
AGCCCAACGTGCTGCCCTCGTCGACGAACCCGACCCGGCCGTTCACGGTCAACACCGTGGCCGAGCACCTCGACATGCTC
ATGGTCTGCCACCACCTCGACCCCCGGATCGAGGAGGACCTGGCCTTTGCCGAGAGCCGCATCCGCCGCGAGACCATCGC
CGCCGAGGACATCCTCCAGGACATGGGCGCGATCTCGATGATGACCTCGGACAGCCAGGCCATGGGACGCGTGGGCGAAG
TCATCCTGCGCACCTGGCAGACCGCGCACAAGATGAAGCTGCAGCGCGACGGCGACGCCGCGCCGCCCAACGACAACGCG
CGCGCCAAGCGCTACGTCGCCAAGTACACCATCAACCCGGCCATCGCCCAGGGCATCGCGGCGCATGTTGGCTCGGTCGA
GGTCGGCAAGCTGGCCGACCTGGTCGTGTGGCAGCCGGCCTTCTTCGGCGTCAAGCCGGAGCTGGTGATCAAGGGCGGCG
CTATCGCCATGGCGCCGATGGGCGACCCCAACGCGTCCATCTCCACGCCGCAGCCCGTGCACTACCGGCCCATGTTCGGC
AGCTACAGCCGCTCGCGCGAGGTTGGCTCGCTGCTGTTCGTGAGCCAGGCCAGCATCGACGGCGGCATCGAGCAGCGGCT
CGGTCTGGGCCGGCGCTGCGTGGCCGTCAAGGGCACGCGCGGGCTGCGCAAGGCCGATATGAAGCTCAACGACCTCGCCC
CCGCGATGGAGGTGGACCCGCTCAGCTACGAGGTCCGCGCCGACGGCGAGCTGCTCACCTGCGAGCCGCTGGCGGTGCTG
CCCATGGCTCAGCGCTACTTCCTGTTCTAG

Protein sequence :
MAHNAKISRREYAEKFGPTVGDRIRLADTELFIEVEKDHAIYGEEVKFGGGKVIRDGMGQSPRAHAEGAVDTVITNAVIL
DWWGVVKADIGIKDGLIAAIGKAGNPDIQPGVDIIIGPGTEIIAGEGRIVTAGGIDAHIHFIAPQQIEEALCSGITTMLG
GGTGPAAGTTATTCTPGPWHIERMLMAAPAFPMNLGFFGKGNTSQPAALVEQIEAGACGLKLHEDWGSTPAAIRNCLSVA
EQYDVQVALHADTLNEAGFVEDTRAAFEDRTVHVFHTEGAGGGHAPDVIRLVGEPNVLPSSTNPTRPFTVNTVAEHLDML
MVCHHLDPRIEEDLAFAESRIRRETIAAEDILQDMGAISMMTSDSQAMGRVGEVILRTWQTAHKMKLQRDGDAAPPNDNA
RAKRYVAKYTINPAIAQGIAAHVGSVEVGKLADLVVWQPAFFGVKPELVIKGGAIAMAPMGDPNASISTPQPVHYRPMFG
SYSRSREVGSLLFVSQASIDGGIEQRLGLGRRCVAVKGTRGLRKADMKLNDLAPAMEVDPLSYEVRADGELLTCEPLAVL
PMAQRYFLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ureC NP_286680.1 urease subunit alpha Virulence TAI Protein 3e-172 67
ureC NP_287088.1 urease subunit alpha Not tested TAI Protein 3e-172 67
ureC YP_005684266.1 Urease alpha subunit Not tested PiCp 7 Protein 8e-159 61
ureC YP_005682174.1 Urease alpha subunit Not tested PiCp 7 Protein 7e-159 61
ureC YP_003784325.1 urease subunit alpha Not tested PiCp 7 Protein 7e-159 61
ureC YP_005686358.1 Urease alpha subunit Not tested PiCp 7 Protein 7e-159 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hoch_1704 YP_003266147.1 urease subunit alpha VFG0270 Protein 9e-153 62