Gene Information

Name : Hneap_0939 (Hneap_0939)
Accession : YP_003262828.1
Strain : Halothiobacillus neapolitanus c2
Genome accession: NC_013422
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2826
EC number : -
Position : 1004956 - 1005984 bp
Length : 1029 bp
Strand : -
Note : PFAM: integrase; KEGG: ajs:Ajs_2157 integrase catalytic subunit

DNA sequence :
ATGTTTTATTCCGAACTCAGCGTTGAAGAGCGCGCCACCATTCAAATCGGTCATGCTCAGGGGCTCAGCCAGCGCAAGAT
TGCCCGTCTGATCAACCGATCCCCTTCGACCATCAGCCGAGAGCTGCGCCGCAATCGAGATGACTGTAGAGACTACTCGG
CTCGCGCAGCCCAGCAACAGATGCAGGCTCGCCGCCAGGTTTGCCGACCGAAGCACAAGCTGTTGCCGGGAAGTGAGCGC
TTCGAGTTGGTGGTCCATTTGCTGCGCGAGCGTTTGTCTCCAGAGCAGATTGCCGGCAAGCTACGCCGTATGAACATACC
CAGCCTCACAGATGCCTACGTTTGTCGCGAGACGATTTACAACGCGATCTATGCCTTGCCGGTCGGCGAGCTACGCAAGG
AGTTGATCATCTGTCTTCGTCAGGGCAAGACAGCACGTAGACCACGCGCTGGTGGTGTGGATCGGCGTGGTCAGATCCCG
GAGATGGTGAGCATTCATGTTCGTCCTCCCGAGATCGAAGACCGCCTGATGCCGGGGCATTGGGAAGGCGATTTGATCAA
GGGCAAGGCTAACGCATCGTCTGTGGGCACGCTGGTCGAGCGCAGCAGTGGCTACCTGATGCTGGTGAAGATGAATGACG
CGACAGCGACCTCGGCGATGGAAGGCTTCAGCGCGGCACTCAATCGTATGCCGCAGGCGGTGCGCAAGAGCATGACCTAC
GACCAAGGCCGGGAAATGGCACGGCACGCTGAGATCACACAGCGAACCGGGGTGGCTATCTACTTCTGCGATCCGCATAG
CCCCTGGCAACGTGGCAGCAACGAAAATATCAACGGGTTGATCCGCCAGTACCTACCCAAGGGCACGGACTTGTCTGCGC
ACAGTCAGGAGGACCTGGATGCCATTGCGTTGCAACTGAACTTGCGTCCGCGAAAGCGATTCGACTTCAAATGTCCTATC
GAAGTGATGAGCGAAGTGATGGAGAAAGCCATAGCTATGCGCCATGATGCGCCTGCTTCAATTCAATAA

Protein sequence :
MFYSELSVEERATIQIGHAQGLSQRKIARLINRSPSTISRELRRNRDDCRDYSARAAQQQMQARRQVCRPKHKLLPGSER
FELVVHLLRERLSPEQIAGKLRRMNIPSLTDAYVCRETIYNAIYALPVGELRKELIICLRQGKTARRPRAGGVDRRGQIP
EMVSIHVRPPEIEDRLMPGHWEGDLIKGKANASSVGTLVERSSGYLMLVKMNDATATSAMEGFSAALNRMPQAVRKSMTY
DQGREMARHAEITQRTGVAIYFCDPHSPWQRGSNENINGLIRQYLPKGTDLSAHSQEDLDAIALQLNLRPRKRFDFKCPI
EVMSEVMEKAIAMRHDAPASIQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAC39292.1 - Not tested LPA Protein 3e-47 41