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Name : Hneap_0886 (Hneap_0886) Accession : YP_003262776.1 Strain : Halothiobacillus neapolitanus c2 Genome accession: NC_013422 Putative virulence/resistance : Unknown Product : DNA-directed DNA polymerase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0389 EC number : 2.7.7.7 Position : 955880 - 957199 bp Length : 1320 bp Strand : + Note : PFAM: UMUC domain protein DNA-repair protein; KEGG: eba:p2A244 DNA repair protein DNA sequence : ATGCCGGTTGCAGCATCCCCCCGATTGGACAGCACGCGGCGCAAGCCGGTTTTTGCGCTGGTCGATGGCAATAATTTTTA TGTGTCCTGCGAGCGGGTGTTCAACCCGGCACTTGAGGCGCGTCCGGTCGTGGTTTTGTCGAATAACGATGGCTGTGCCG TCGCCCGTTCGGCAGAAGCCAAGGCGCTGGGGATTGCGATGGGGCAGCCGTGGTTCCAGATTCAGTCGATGGCGCAGTCG CACGGTTTGATTGCCTTGTCGTCGAACTACGAGCTCTACGCGGACATGAGTAACCGCATGATGCGAATACTGGCCGATTT TTCTCCCCGTCAGGAAGTCTATTCGATTGATGAATGCTTTTTGGATTTACGGGGGATGGATGTCGATTTGACGTTATTGG CACACGGCATGCGCCAGCGTGTCGCACAGTGGATTGGTATCCCGGTCGGTATCGGGATTGGAGAATCCAAGACGCTGGCG AAGCTGGCCAATCATCTGGCGAAAAAACAGCCGCAGTGGCAGGGCGTGTGTGATTTGACCACGCTGGAGGAATCGGCGCA GGATCGTTTGATGGCTTGCGTCGATGTCGGTGATGTCTGGGGTGTCGGGCGGCGCTTGAAAGAACAGCTCAACGCGCGGG GAATTGTTACCGCACTAGACCTGAAACGCGCCGATCCGGTGATTATTCAGCGACAATTTTCGGTTGTATTGGCGCGCACG GTACGCGAGCTTCAGGGTATTTCCTGCCTGCCGCTGGAATCAATGGTGGCGCCTCGGCAACAAATTATCGTTAGTCGCTC ATTTGGCAAACCGGTTTGGTATCTGCCCGAACTGCGTCAAGCCATCACGGCGCACATGAGCCGCGCGGCCGAAAAGCTTC GAACGCAAGCCAGCGTAGCGCAGATGGTGCAGGTCTTTATTCGCACCAGTCCATTCAGTGCGCGGCCTTTTTATAGCCAG GGCATCACTCTGCCCTTGGCAGCGGCCAGCGATGATACCCGCTTGCTCGTTAAAATCGCCCAGCAGGGTTTAACCCGGAT TTACCGCGCCGGTTATGACTATCAAAAAGTCGGTGTTTTGTTAATGGATATTCAACCCAAAGGGCAGGGCGCGCGGACAG ATTTATTCCACGATGCGCAACACGACCGGCGCACCGATCAACTGATGCAAACACTCGATTCGATCAATGCCCGAATGGGC AAGCACACGCTCAAGCTGGCGGGCGAGGGATTCGTGCAGCCTTGGGCCATGAAGCGCAATCGGCATACACCCGCGTATAC GACCAATATTCGTCAACTGGCGCGTGCATGGGCGAAGTGA Protein sequence : MPVAASPRLDSTRRKPVFALVDGNNFYVSCERVFNPALEARPVVVLSNNDGCAVARSAEAKALGIAMGQPWFQIQSMAQS HGLIALSSNYELYADMSNRMMRILADFSPRQEVYSIDECFLDLRGMDVDLTLLAHGMRQRVAQWIGIPVGIGIGESKTLA KLANHLAKKQPQWQGVCDLTTLEESAQDRLMACVDVGDVWGVGRRLKEQLNARGIVTALDLKRADPVIIQRQFSVVLART VRELQGISCLPLESMVAPRQQIIVSRSFGKPVWYLPELRQAITAHMSRAAEKLRTQASVAQMVQVFIRTSPFSARPFYSQ GITLPLAAASDDTRLLVKIAQQGLTRIYRAGYDYQKVGVLLMDIQPKGQGARTDLFHDAQHDRRTDQLMQTLDSINARMG KHTLKLAGEGFVQPWAMKRNRHTPAYTTNIRQLARAWAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 4e-78 | 47 |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 4e-78 | 47 |
| unnamed | ABR13403.1 | DNA-directed DNA polymerase | Not tested | PAGI-5 | Protein | 1e-63 | 45 |
| rulB | CAI36137.1 | nucleotidyltransferase/DNA polymerase | Not tested | PPHGI-1 | Protein | 1e-73 | 43 |
