Gene Information

Name : Hneap_0009 (Hneap_0009)
Accession : YP_003261922.1
Strain : Halothiobacillus neapolitanus c2
Genome accession: NC_013422
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 12156 - 12857 bp
Length : 702 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: kko:Kkor_0791 ABC transporter

DNA sequence :
TTGCCGGAGGATACTGCCTTGATTCTGCGGGCGCTGCGGGTTTCTAAAACCGTCACAGCGCCCGGGAACGAACCTTTGAC
CATTCTGCGTGATGCGAGTTTAACAGTTGCCGAGGGTGAGGCTGTGGCGTTAATGGGTGCATCGGGGGCGGGCAAGTCTA
CCTTGCTGGCTTTGCTGGCAGGTTTGGATACGCCGACGAGCGGTGAGGTTGAGTTGGCCGGTTTTTCTCTGAACAACTTA
AATGAGGACGAGCGCGCCGCCGTCCGTGCGGGCCGGGTGGGATTTGTTTTTCAGTCATTTCAGTTGATTGATGGCTTGAC
GGCTCTGGAAAATGTGGCTTTGCCGCTGGAATTGCAGGGCACAGCGAACAGTACGGCGCAGGCCAAAGCGGCGTTAGATG
AGGTGGGTTTGAGCCACCGTCTGCACCATCTGCCCAAGGTGCTTTCAGGCGGTGAACAACAGCGGGTTGCCCTGGCGCGG
GCATTTGCCGGAACGCCCGCCATTTTGTTTGCCGATGAGCCAACCGGCTCGCTCGACACTGCCACAGGCGAGCGCATCAT
TGATTTGCTGTTCGCGCTGCGCGATCAGCATCAAACCGCGTTGGTACTGGTAACGCACGATCCGGCCTTGGCTGCCCGAT
GTAATCGTGGCTATCGCTTACAGGGTGGCTTGCAGGGTGGAGAATTAACCCCATGGCAATAG

Protein sequence :
MPEDTALILRALRVSKTVTAPGNEPLTILRDASLTVAEGEAVALMGASGAGKSTLLALLAGLDTPTSGEVELAGFSLNNL
NEDERAAVRAGRVGFVFQSFQLIDGLTALENVALPLELQGTANSTAQAKAALDEVGLSHRLHHLPKVLSGGEQQRVALAR
AFAGTPAILFADEPTGSLDTATGERIIDLLFALRDQHQTALVLVTHDPALAARCNRGYRLQGGLQGGELTPWQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-31 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-31 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-31 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-27 44
unnamed ABR13524.1 phosphite import ATP-binding protein Not tested PAGI-7 Protein 3e-16 44
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 2e-17 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hneap_0009 YP_003261922.1 ABC transporter NC_008702.1.4606598. Protein 2e-34 52
Hneap_0009 YP_003261922.1 ABC transporter NC_012469.1.7686878. Protein 5e-39 50
Hneap_0009 YP_003261922.1 ABC transporter NC_012469.1.7685735. Protein 9e-34 44
Hneap_0009 YP_003261922.1 ABC transporter CP001581.1.gene598.p Protein 3e-31 41