Gene Information

Name : Hneap_0781 (Hneap_0781)
Accession : YP_003262677.1
Strain : Halothiobacillus neapolitanus c2
Genome accession: NC_013422
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 843315 - 844031 bp
Length : 717 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dar:Daro_3917 ABC transporter

DNA sequence : 
ATGAGTGATGCGCACGCACCAGCCCCCTTGCTCGAACTGGCGGGTGTAACCAAAGTGTACGGCAAGGGCAGCGCGTCCAT
GCAAGCCCTGCGCGGTATCAATCTGGCGATTGCCGAAGGCGAGTTTGTGGCCATCATGGGCGCCAGTGGCTCGGGCAAAA
GCACCGCGATGAACATCATCGGCTGTCTGGACACACCCACCAGTGGGAACTACCGGTTCCGAGGGTTTGAAGTCGGGCAA
CTGAATCGTGACCAGAGAGCGCTGTTGCGACGCCACGAACTGGGATTCGTTTTCCAGGGGTTCAATCTGCTGGCCCGAAC
TTCCGCTCTGGAAAATGTCGAATTGCCGCTGATTTATCAGGGTTTACCGATTACAGAGCGCCACAATCGGGCACGTGCGG
CACTTGCCGATGTGGGACTGGACGGCTGGGAACACCATACGCCCAGCGAACTTTCGGGCGGACAACAGCAACGGGTCGCT
ATTGCGCGCGCCATCGTGACGCGCCCCGCCATCCTGCTGGCCGACGAGCCGACCGGTAATCTCGATACAGCTCGAAGTCA
GGAAGTCATGGAAATGATCACCCGCTTCAACCGCGACAAGGGCATTACCGTGGTGATGGTGACCCATGAACCGGACATGG
CTGCCTATGCGAGGCGCGTCATCCATTTTCGCGATGGCTTGGTCGAAAGCGACACCACTCAGACAGGAGCGGCATGA

Protein sequence : 
MSDAHAPAPLLELAGVTKVYGKGSASMQALRGINLAIAEGEFVAIMGASGSGKSTAMNIIGCLDTPTSGNYRFRGFEVGQ
LNRDQRALLRRHELGFVFQGFNLLARTSALENVELPLIYQGLPITERHNRARAALADVGLDGWEHHTPSELSGGQQQRVA
IARAIVTRPAILLADEPTGNLDTARSQEVMEMITRFNRDKGITVVMVTHEPDMAAYARRVIHFRDGLVESDTTQTGAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 6e-33 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-33 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hneap_0781 YP_003262677.1 ABC transporter NC_012469.1.7686878. Protein 5e-56 54
Hneap_0781 YP_003262677.1 ABC transporter NC_008702.1.4606598. Protein 1e-47 50
Hneap_0781 YP_003262677.1 ABC transporter CP001581.1.gene798.p Protein 1e-38 45
Hneap_0781 YP_003262677.1 ABC transporter CP001581.1.gene598.p Protein 2e-38 42
Hneap_0781 YP_003262677.1 ABC transporter NC_012469.1.7685735. Protein 3e-34 42