Gene Information

Name : Hneap_0711 (Hneap_0711)
Accession : YP_003262608.1
Strain : Halothiobacillus neapolitanus c2
Genome accession: NC_013422
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliQ
Function : -
COG functional category : N : Cell motility
COG ID : COG1987
EC number : -
Position : 773125 - 773394 bp
Length : 270 bp
Strand : +
Note : TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; KEGG: avn:Avin_24120 flagellar biosynthetic protein

DNA sequence : 
ATGAGCCCGGATACCGTTCTCGATCTTACCCGTCAGGCGATGGTCATCATCCTGTTGCTGTCCATGCCGATTCTGTTGAC
CGCGCTGGCGGTGGGGTTGTTGGTCGGTATGTTTCAGGCGGCGACGCAAATCAACGAGATGACCTTGAGCTTCATCCCGA
AGCTGTTCGCGGTGGTTCTGGCCATATTGCTGGCAGGTCCGTGGATGCTGCACCTGCTGGTTGATTTCACCACCGACCTG
TTCCATCGAATTCCCGGGCTGATCGGCTGA

Protein sequence : 
MSPDTVLDLTRQAMVIILLLSMPILLTALAVGLLVGMFQAATQINEMTLSFIPKLFAVVLAILLAGPWMLHLLVDFTTDL
FHRIPGLIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcS AAT96344.1 HrcS Virulence S-PAI Protein 0.002 43
hrcS AAT96263.1 HrcS Virulence S-PAI Protein 0.002 43
hrcS AAT96304.1 HrcS Virulence S-PAI Protein 0.002 43
lscS AAO18039.1 LscS Virulence TTSS locus Protein 3e-06 42
hrcS AAB06006.1 HrcS Virulence Hrp PAI Protein 6e-05 42
hrcS ABA47280.1 HrcS Virulence S-PAI Protein 0.003 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hneap_0711 YP_003262608.1 flagellar biosynthetic protein FliQ VFG2495 Protein 4e-11 57
Hneap_0711 YP_003262608.1 flagellar biosynthetic protein FliQ VFG2339 Protein 1e-12 56
Hneap_0711 YP_003262608.1 flagellar biosynthetic protein FliQ VFG2015 Protein 1e-11 53
Hneap_0711 YP_003262608.1 flagellar biosynthetic protein FliQ VFG1260 Protein 1e-10 47
Hneap_0711 YP_003262608.1 flagellar biosynthetic protein FliQ VFG0395 Protein 9e-06 41