Gene Information

Name : fliP (Hneap_0710)
Accession : YP_003262607.1
Strain : Halothiobacillus neapolitanus c2
Genome accession: NC_013422
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 772258 - 773082 bp
Length : 825 bp
Strand : +
Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus

DNA sequence : 
ATGAGCAACGAAAAGATGAGCCGACTACCTGCATCGCGTTTCGGGTGGCTCTTGTTGTTGATTGCAGGATTATTTCTCTG
CACCACCCATCTGGCACACGCCGCGCCTGCGGTGACTCAGGCGATGGCCGCACCGGGTTTGCCGGCGGTCACGCTGACGA
CAGACGGCGCTCAAACCCAGTACAGCCTGACTTTGCAGATTCTGGCGTTGATGACGGTGCTGACTTTGCTGCCGTCGTTG
CTGCTGCTGATGACTTCGTTTACTCGGATCATTATCGTGTTATCCCTGATGCGCCAAGCGTTGGGGCTGACACAAACACC
ATCGAACCAGATTCTGATCGGCCTCGCGCTTTTTTTGACGCTGTTCATCATGGCGCCGGTGTTTCAGAAATCGTATGACG
AGGGCATCAAGCCCTATATGGATCAGAAAATTACGGCAAATGTTGCCATCGAAAAAGCGGCGGAACCTCTGCGAACATTC
ATGCTCAACCAGACCCGCCAGTCGGATATCGCATTGTTCCAGAACATTGGTCATTACCCGGCCTTTGAGACGCCAAAGGA
TGTGCCGTACACCGTACTGATGGCTGCGTTCATCACGTCGGAACTGAAAACTGCATTCGAGATTGGTTTTTTGATTTTCA
TTCCCTTTTTGATCATCGATCTTGTCGTGGCGTCGGTCCTGATGTCGATGGGGATGATGATGCTTTCACCCATGATCGTG
TCCTTGCCCTTCAAGCTCATGCTATTCGTCCTAGTGGATGGCTGGACGCTGATCATGGGCACACTGGCGTCGAGCTTTTA
TATGGGTGCACCTCTTGGCAGTTAG

Protein sequence : 
MSNEKMSRLPASRFGWLLLLIAGLFLCTTHLAHAAPAVTQAMAAPGLPAVTLTTDGAQTQYSLTLQILALMTVLTLLPSL
LLLMTSFTRIIIVLSLMRQALGLTQTPSNQILIGLALFLTLFIMAPVFQKSYDEGIKPYMDQKITANVAIEKAAEPLRTF
MLNQTRQSDIALFQNIGHYPAFETPKDVPYTVLMAAFITSELKTAFEIGFLIFIPFLIIDLVVASVLMSMGMMMLSPMIV
SLPFKLMLFVLVDGWTLIMGTLASSFYMGAPLGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 8e-10 41
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 4e-14 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_003262607.1 flagellar biosynthesis protein FliP VFG2016 Protein 3e-39 62
fliP YP_003262607.1 flagellar biosynthesis protein FliP VFG1259 Protein 3e-41 62
fliP YP_003262607.1 flagellar biosynthesis protein FliP VFG0044 Protein 6e-14 41