Gene Information

Name : Hneap_0500 (Hneap_0500)
Accession : YP_003262402.1
Strain : Halothiobacillus neapolitanus c2
Genome accession: NC_013422
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 533871 - 535760 bp
Length : 1890 bp
Strand : +
Note : TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; KEGG: tgr:Tgr7_0487 thiamine biosynthesis protein ThiC

DNA sequence :
ATGAGCGCAGTGCCGAATGATTTTTTAGCTAAAACGGCCGGGTTGTCCGAATCGGTCATCGCACCGTTTCCGGCCAGTGC
CAAAATTTACCAGACAGGTTCGCGCCCAGACATTCGCGTGCCGATGCGTGAGGTTACTTTAACGCCGACCCGCAGTGATC
GCGGCGTGGAAATCAATCCGCCGATCACGATTTACGATACCTCCGGCCCGTACACCGACCCTGCGGTCAAAATTGACCTG
CTCAAGGGGTTAGAGCCTCTGCGCGAGAGCTGGATTGCCGAGCGTGCCGATACCGAAACGCTCAGCGGCCCGTCGTCTGA
TTATGGTTTGGCGCGTTTGAATGATCCTAAAACCGCTGGCTTGCGTTTCGGTCATATCCGCACACCCATCAAGGCGAAAG
CGGGCAAAAACGTCTCGCAGATGCATTACGCCCGCCAAGGCATCATCACGCCTGAAATGGAATTCGTGGCAATCCGCGAA
AACAACCGCCTGCAAGAAATGCGTGCCGATCCGCGCTACAAAGCGCTGCTGCGTCAGCACAAGGGCGAGTCTTTCGGAGC
ATCCATTCCCGATGTCATCACGCCGGAGTTTGTGCGCGACGAGATCGCCCGTGGCCGCGCCATTATCCCGGCGAACATCA
ATCACCCCGAAATCGAGCCGATGATTATCGGGCGGAATTTTCGCACCAAAATCAACGGCAATCTGGGCAATTCCGCCACC
ACTTCCGGTATCGCCGAAGAAGTCGAAAAGATGGTCTGGGGCATTCGCTGGGGCGCGGATACCATCATGGATTTGTCCAC
CGGCAAGAACATCCACGAAACCCGCGAATGGATTTTGCGCAATGCACCCGTGCCGATCGGCACCGTGCCGATTTATCAGG
CATTGGAAAAGGTCAACGGCAAGGCCGAAGACCTAACTTGGGAGATTTTCCGCGATACCTTGATCGAACAGGCGGAGCAG
GGCGTGGATTACTTCACCATCCACGCCGGTGTGCTGCTGCGCTATGTGCCGCTGACGGCCGAGCGTGTGACGGGCATTGT
GTCCCGTGGTGGCTCGATCATGGCCAAATGGTGCCTGGCGCATCATCAAGAGAGCTTTTTGTACACGCATTTCGAAGAGA
TTTGCGAGATTATGAAAGCCTACGATGTTTCATTCTCATTGGGCGATGGCCTGCGCCCCGGCTGCCTTGCTGATGCGAAC
GATGCGGCGCAGTTCGGCGAACTGCAAACGCTGGGCGAGCTGACCAAAATCGCTTGGGAACACGATGTGCAGGTAATGAT
CGAAGGCCCCGGCCACGTGCCGTTGCAGATGATCAAAGAGAACATGGACAAAGAGCTGGCCGATTGCTACGAGGCGCCGT
TTTATACCTTGGGCCCGCTGGTCACCGACATCGCGCCCGGATATGACCACATCACCAGTGGCATCGGCGCGGCGAACATC
GGTTGGTACGGTACCGCTATGCTGTGCTATGTCACGCCAAAAGAGCATCTGGGCTTGCCGGATAAAGACGACGTGCGCGA
AGGCGTGATTACTTACAAGATCGCCGCCCACGCTTCCGATTTGGCCAAGGGGTTTCCCGGCGCGCAGGTGCGCGACAACG
CTCTATCCAAGGCGCGTTTTGAATTCCGTTGGGCCGACCAGTTCAATCTGGGTCTCGATCCGGAGCGCGCGCGTGAATAC
CACGATGAAACTTTGCCAGCCGAAGCGCACAAGGTGGCGCATTTTTGCTCAATGTGCGGCCCGCATTTCTGCTCGATGAA
AATCACCCAAGATGTGCGTGACTACGCAGAAACACTGGGTGTCGACGAGATCGAAGCCATCAAAAAAGGCATGGAAGAAA
AGTCGATTGAATTTGTGAAAAAAGGCGCCGAGGTGTACGGTCGCATCTGA

Protein sequence :
MSAVPNDFLAKTAGLSESVIAPFPASAKIYQTGSRPDIRVPMREVTLTPTRSDRGVEINPPITIYDTSGPYTDPAVKIDL
LKGLEPLRESWIAERADTETLSGPSSDYGLARLNDPKTAGLRFGHIRTPIKAKAGKNVSQMHYARQGIITPEMEFVAIRE
NNRLQEMRADPRYKALLRQHKGESFGASIPDVITPEFVRDEIARGRAIIPANINHPEIEPMIIGRNFRTKINGNLGNSAT
TSGIAEEVEKMVWGIRWGADTIMDLSTGKNIHETREWILRNAPVPIGTVPIYQALEKVNGKAEDLTWEIFRDTLIEQAEQ
GVDYFTIHAGVLLRYVPLTAERVTGIVSRGGSIMAKWCLAHHQESFLYTHFEEICEIMKAYDVSFSLGDGLRPGCLADAN
DAAQFGELQTLGELTKIAWEHDVQVMIEGPGHVPLQMIKENMDKELADCYEAPFYTLGPLVTDIAPGYDHITSGIGAANI
GWYGTAMLCYVTPKEHLGLPDKDDVREGVITYKIAAHASDLAKGFPGAQVRDNALSKARFEFRWADQFNLGLDPERAREY
HDETLPAEAHKVAHFCSMCGPHFCSMKITQDVRDYAETLGVDEIEAIKKGMEEKSIEFVKKGAEVYGRI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 75
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 74
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 74