Gene Information

Name : Hneap_0482 (Hneap_0482)
Accession : YP_003262384.1
Strain : Halothiobacillus neapolitanus c2
Genome accession: NC_013422
Putative virulence/resistance : Virulence
Product : phage transcriptional regulator AlpA
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 510414 - 510584 bp
Length : 171 bp
Strand : -
Note : PFAM: prophage CP4-57 regulator; KEGG: she:Shewmr4_2784 phage transcriptional regulator, AlpA

DNA sequence :
ATGGATAGTATTTTACGCCTGCACGATGTGCTCCGGATTACCGGCGCATCCCGATCGAGCATTTATCTGTGGGTCAGTGC
TGGGATTTTTCCGCAACCCGTGAAACTCGGCGTTCGAGCGGTCGGATGGCGAAGATCAGAGGTCCAGCAATGGCTGGATG
ATCGCCGTTAA

Protein sequence :
MDSILRLHDVLRITGASRSSIYLWVSAGIFPQPVKLGVRAVGWRRSEVQQWLDDRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 9e-08 48
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 1e-07 48
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 1e-07 48
ORF C109 AAN62202.1 phage-related protein Not tested PAGI-2(C) Protein 2e-07 47
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 9e-08 46
ORF SG104 AAN62325.1 phage-related protein Not tested PAGI-3(SG) Protein 2e-06 43
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 2e-07 41
unnamed CAA21398.1 - Not tested HPI Protein 3e-07 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hneap_0482 YP_003262384.1 phage transcriptional regulator AlpA VFG1118 Protein 4e-08 48