Gene Information

Name : Hneap_0425 (Hneap_0425)
Accession : YP_003262329.1
Strain : Halothiobacillus neapolitanus c2
Genome accession: NC_013422
Putative virulence/resistance : Virulence
Product : redoxin
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 446044 - 446544 bp
Length : 501 bp
Strand : +
Note : PFAM: redoxin; alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; KEGG: pen:PSEEN2672 thiol peroxidase

DNA sequence : 
ATGAGCCAAGTTACTTTTTTGGGTAATCCCGTCGAGGTTGCTGGTGTTATGCCCGCGGTTGGTTCGCCTGCGCCTGCCTT
CACGCTCACCGATGGCGAGTTGCAGGAAAAATCTCTGGGTGATTTCGCGGGCAAAAAGAAAATCCTGAATATTTTCCCCA
GCCTCGACACCCCCACCTGCGCGCAATCGGTACGCAGCTTCAACGAAAAAGCAAACAGCCACCCGGACACCGCTGTGCTC
TGTATTTCTGCCGATCTACCCTTCGCACAGGGCCGTTTTTGCGGCGCTGAGGGCCTGGATAATGTGATCACGTTGTCCAC
ATTCCGGCATCCGGAGTTTTTGCGTGACTACGGTGTGCTGCTGGCCGATGGCGCGTTGGCTCATCTGGCAGCGCGCGCCG
TGATCGTGCTCGACGAACACGATCAGGTGCGCTACGTGCAACTGGTTCCAGAAATTGCCGACGAGCCGGATTACGCCGCA
GCCTTGGCGGCACTAGCCTGA

Protein sequence : 
MSQVTFLGNPVEVAGVMPAVGSPAPAFTLTDGELQEKSLGDFAGKKKILNIFPSLDTPTCAQSVRSFNEKANSHPDTAVL
CISADLPFAQGRFCGAEGLDNVITLSTFRHPEFLRDYGVLLADGALAHLAARAVIVLDEHDQVRYVQLVPEIADEPDYAA
ALAALA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 2e-26 50
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 1e-26 50
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 2e-26 49
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 1e-26 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hneap_0425 YP_003262329.1 redoxin VFG0087 Protein 6e-27 50