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Name : Hneap_0422 (Hneap_0422) Accession : YP_003262326.1 Strain : Halothiobacillus neapolitanus c2 Genome accession: NC_013422 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 442272 - 443807 bp Length : 1536 bp Strand : + Note : TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: tgr:Tgr7_1462 lysyl-tRNA synthetase DNA sequence : ATGACCGCTAACGAACAAGTCAACGGCGCGGCCGAAGAGCGAAGCGCCGAGAGCCTCTTGGCCGAAGAAAACAAACTGAT TGCCGAGCGGCGCGACAAGCTGAGCCGTATTCGTGCGGCGGGCAACGCCTTCCCCAATGATTTCCGTCGGGATGCCAGCG CAGCGGAATTGCAGGCCGAATACGCCGAAAAAGAAGCCGATTACTTCGAGCAGAATCCCCGTCGTGTCGTCGTCGCTGGG CGCGTGATGGCCAAGCGCCTGATGGGCAAGGCAAGTTTTCTGTCGATTCTCGATCACAGCGGCCGGATTCAGTTGTATGT CGCGCGCGATGCCTTGGGTGAAGCAACCTATGATGACTTCAAAACCTGGGATATCGGCGATATCGTCGGCGGCGAAGGCG CTTTGTTCAAAACCCAGAAGGGTGAGCTTTCCGTCCGCGTGGACTCGATTCGTCTGCTGACCAAGAGCCTGCGCCCGCTG CCGGATAAATTCCACGGCATGTCGGATACCGAGCAGCGCTATCGCCAGCGTTACGTGGATCTGATCATGAACGAACCGGT GCGCGATACGTTCCGCAAACGCACCCAGATTATCCAGTTCATGCGCAATTATCTGAACGCCAAAGACTTCCTCGAAGTTG AAACCCCGATGATGCATGTGATCCCCGGCGGTGCCTCGGCCAAGCCATTCACGACTTTCCACAACGCGCTCGATATGGAT CTGTATCTGCGCATCGCCCCCGAGCTTTACCTGAAGCGGCTGGTGGTCGGTGGATTCGAGCGGGTATACGAGATCAACCG TAACTTCCGTAACGAAGGCCTGTCGACGCGCCATAACCCTGAATTCACCATGATCGAGTTCTATCAGGCCTATGCCGATT ACATCGATCTGATGGACATGACGGAAGATCTGCTGCGTCGCCTGTCGGAATCGGTGTGCGGTTCAACTACGCTGACATAT CAGGGCGTCGAGTTCGATTTGGCTCAGCCGTTTGCCCGTTTGTCGGTGGTCAATGCCATCCTGGAACACAACCCCGACGT GACGCGCGAGCAGCTCTCGGATATCGACAGTGCACGTCGCATTGCCGAAGGCTTGGGTATCAACATCAAGGACTCCTATG GACTGGGTAAAATCCAGATCGAAATCTTTGAAGAAACGGCCGAGCATAAGTTGATTCAGCCGACGTTCATTACCGAATAC CCGGCCGAAGTGTCGCCTTTGGCGCGCCGGAGCGACGATAATCCGTTCGTGACCGACCGTTTCGAGTTCTTCATCGGCGG TCGTGAAATCGCCAATGGTTTCTCGGAGTTGAACGACGCCGAAGATCAAGCAGAACGCTTCATGGCGCAGGTGGCTGAGA AGGATGCCGGAGACGACGAAGCCATGCACTTCGACTCCGACTACATCCGCGCGCTGGAACACGGTATGCCGCCGACAGCG GGCGAAGGGATCGGCATCGACCGTCTCGTGATGTTCCTGACCGACTCGCCATCGATCCGCGACGTTTTGCTATTCCCGCA CATGCGGCCGGAATAA Protein sequence : MTANEQVNGAAEERSAESLLAEENKLIAERRDKLSRIRAAGNAFPNDFRRDASAAELQAEYAEKEADYFEQNPRRVVVAG RVMAKRLMGKASFLSILDHSGRIQLYVARDALGEATYDDFKTWDIGDIVGGEGALFKTQKGELSVRVDSIRLLTKSLRPL PDKFHGMSDTEQRYRQRYVDLIMNEPVRDTFRKRTQIIQFMRNYLNAKDFLEVETPMMHVIPGGASAKPFTTFHNALDMD LYLRIAPELYLKRLVVGGFERVYEINRNFRNEGLSTRHNPEFTMIEFYQAYADYIDLMDMTEDLLRRLSESVCGSTTLTY QGVEFDLAQPFARLSVVNAILEHNPDVTREQLSDIDSARRIAEGLGINIKDSYGLGKIQIEIFEETAEHKLIQPTFITEY PAEVSPLARRSDDNPFVTDRFEFFIGGREIANGFSELNDAEDQAERFMAQVAEKDAGDDEAMHFDSDYIRALEHGMPPTA GEGIGIDRLVMFLTDSPSIRDVLLFPHMRPE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 6e-137 | 59 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 1e-85 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Hneap_0422 | YP_003262326.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 3e-137 | 59 |
