|
Name : Hneap_2372 (Hneap_2372) Accession : YP_003264228.1 Strain : Halothiobacillus neapolitanus c2 Genome accession: NC_013422 Putative virulence/resistance : Virulence Product : betaine aldehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.8 Position : 2537681 - 2539168 bp Length : 1488 bp Strand : - Note : PFAM: aldehyde dehydrogenase; KEGG: rfr:Rfer_0356 aldehyde dehydrogenase DNA sequence : ATGAACACGATTGATTGGCATGCCCGGGCGGCGGCGCTCACAATTGACGGTCGCGCCTGGATCAACGGCCAACGCGTCGA TGCCGCCGATGGCAACACGTTCGAATGTCTGTCGCCGGTGGATGGTCGCAAACTGGCGGAGGTGGCGCGCTGCAAGGCGG CGGATGTCGACCAGGCTGTCGTCGCGGCGCGCGGCGCGTTCGAAGACCGGCGCTGGGCCGGTCTGTCGCCGCGGGAGCGC AAGACGATCCTGATCCGTTTTGCCGATCTGGTGTTGGCAAACCGCGAAGAACTGGCGCTGCTGGAAACGCTGGATATGGG CAAACCCATCTCGGCCAGCATGAGCACCGATGTGCCCGCTACGGCGAATACCCTGCGCTGGTACGGCGAAGCGATCGACA AGGTCTACGACGAGATCGCGCCGACCAACGACCGCACCCTGGCGCTGATTACCCGCGAACCCATAGGCGTGGTCGCGGCC ATCGTGCCGTGGAATTATCCCATGCTGATGGCTTCTTGGAAGATTGCACCGGCGCTGGCCGCCGGGAACAGCGTCATCCT CAAGCCTTCGGAAAAATCGCCATTGACCGCGCTGCGTCTGGGCGAACTCGCTTTGGAAGCGGGTATTCCGGCGGGTGTGT TGAATGTGGTGCCGGGCTTTGGCCCGGAGGCCGGTTCGCCGCTGGCTCTTCACAGGGATATCGACTGCATCGCCTTCACC GGTTCGACCGCGGTGGGCAAGAAAATCCAGGTCATGGCGGGCGAGAGCAATCTCAAGCGCGCGTGGTGCGAGCTGGGGGG CAAGTCGCCCAACATCGTCTTCGCCGACTGTCCCGATCTGGACCGTGCCGTGGCTGCTGCTGCCGGTTCGATCTTCTACA ACCAGGGCGAAAGCTGCAACGCGCCGTCGCGCCTGCTGGTCGAGCGCTCCATCCGCGATGAATTCGTCGAGAAACTCAAG CAGTACTCGCCCAAGCACATGCCGGGCGACCCGCTCGATCCCAACACGACGATGGGTGCGCTGGTCGACCAGATGCAGAT GGATAACGTGCTCAAATACATCGAAGCGGGCAAAAGCCAAGGCGCGACCTTGTGCTGTGGTGGCGAGCGCGTCCGCACGG AAACCGGCGGTTTCTATGTGTCGCCGACCATTTTCGACGGCGTGACCAACGAAATGATCATCGCCAGCGAAGAAATCTTC GGCCCCGTGCTGTCGATCATCACCTTCGACTCGCAGGAAGAAGCGATCCGAATCGCCAACGACACCAGCTACGGCCTGGC CGCCGCCGTCTGGACGCGGGATATTTCACGGGCGCATCTTGTGGCCCGTGCCCTGCGCGCCGGGACCGTGCACGTCAACT GCTACGACGAAGACGACATCACCGTGCCGTTCGGCGGATTCAAGCAATCCGGCAACGGTCGCGACAAGTCGCTGCACGCG CTCGAAAAATACACCGAACTCAAAACCACGTGGATCAGCCTCGCCTGA Protein sequence : MNTIDWHARAAALTIDGRAWINGQRVDAADGNTFECLSPVDGRKLAEVARCKAADVDQAVVAARGAFEDRRWAGLSPRER KTILIRFADLVLANREELALLETLDMGKPISASMSTDVPATANTLRWYGEAIDKVYDEIAPTNDRTLALITREPIGVVAA IVPWNYPMLMASWKIAPALAAGNSVILKPSEKSPLTALRLGELALEAGIPAGVLNVVPGFGPEAGSPLALHRDIDCIAFT GSTAVGKKIQVMAGESNLKRAWCELGGKSPNIVFADCPDLDRAVAAAAGSIFYNQGESCNAPSRLLVERSIRDEFVEKLK QYSPKHMPGDPLDPNTTMGALVDQMQMDNVLKYIEAGKSQGATLCCGGERVRTETGGFYVSPTIFDGVTNEMIIASEEIF GPVLSIITFDSQEEAIRIANDTSYGLAAAVWTRDISRAHLVARALRAGTVHVNCYDEDDITVPFGGFKQSGNGRDKSLHA LEKYTELKTTWISLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 5e-127 | 62 |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 1e-76 | 44 |
| aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 7e-78 | 44 |
| aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 7e-78 | 44 |
| aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 7e-78 | 44 |
| aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 1e-77 | 44 |
| hpaE | AAO17179.1 | HpaE | Not tested | tcd island | Protein | 4e-67 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Hneap_2372 | YP_003264228.1 | betaine aldehyde dehydrogenase | VFG0082 | Protein | 5e-77 | 44 |
