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Name : Hneap_0232 (Hneap_0232) Accession : YP_003262142.1 Strain : Halothiobacillus neapolitanus c2 Genome accession: NC_013422 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0677 EC number : - Position : 244073 - 245356 bp Length : 1284 bp Strand : + Note : TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: bpt:Bpet4030 polysaccharide biosynthesis protein DNA sequence : GTGAAGAGCAAGGAAGCCGCTGAACCCATCATTGCTGTCATCGGCCTAGGCTATGTCGGCCTGCCGCTCGCGGTCGAGTT CGGCAAAATACGCCCCGTGATCGGCTTTGATGTTGATGCCACCCGCATTGACCAATTAAAAAGCGGCCACGACCGCACGC GCGAAGTCGAGCCGGATGAGCTGCAAAACGCCCGCCACCTGAGTTATACCGTCGATCCTGCCGATCTGCGAAAAGCCAGC CTATTTATCGTCACCGTGCCCACGCCGATTGACGCGCACAAACGCCCGGACCTCAGCCCGCTGATCAAAGCCAGCGAAAC CGTCGGGCGCGCGCTCAAACGCGGCGATATCGTGATTTATGAATCCACCGTCTACCCCGGCGCCACCGAAGAAGACTGCG TGCCGGTGCTCGAACAATACTCCGGCCTGCGCTTCAACCACGATTTTTACTGCGGCTACAGCCCAGAGCGCATCAACCCC GGCGACAAAACCCACCGCCTGCCCGCCATCAAAAAAGTCACCGCCGGTTCCACCCCTGCCGTGGCCGAAGCGGTCGATGC GCTCTACCGGCAAATCATTACCGCCGGCACCCACCCAGCGCCCAGCATCCGCGTGGCCGAGGCCGCCAAGGTGATTGAAA ACACCCAGCGCGATGTCAATATCGCGCTCATCAACGAACTGGCCATCTTATTCGGCAAACTCGGGCTCGATACCCAAGCC GTGCTCGAAGCGGCGGGCAGCAAATGGAACTTCTTGCCGTTTCGCCCCGGCCTGGTAGGCGGCCACTGCATCGGCGTGGA CCCGTACTACCTCACCCACAAAGCCCAGCAAGTCGGCCATCACCCTGAAATGATATTGGCCGGTCGCCGCATCAACGACG GCATGGGCGCGTATGTGGCCGGCCAACTCATCAAAGCCATGCTGAAAAAAGGCATCACCGTACAAGGCGCGCGCGTACTC GTGCTGGGGCTCACCTTTAAAGAAAACTGCCCCGATCTACGCAACACCCGCGTCATTGATGTGATTACCGAACTCAAAGA CTACGGCCTAACCGTCGATGTGCACGACCCTTGGGCCGATGCCGCTTGCGCACGGCATGAGTACGGACTTGAGCTTACCG CCACGCCACCATCAAATACCTATGAAGCCATCGTGCTGGCCGTTGCCCATCGAGAATTCAGAACCTTGGGCGCACCAGCC ATTCACGCACTCGGCAAAGAACAGCATGTGCTCTACGACCTCAAACACCTCTTTCATGCCGATGAAGCCGACATTCGGTT GTAA Protein sequence : MKSKEAAEPIIAVIGLGYVGLPLAVEFGKIRPVIGFDVDATRIDQLKSGHDRTREVEPDELQNARHLSYTVDPADLRKAS LFIVTVPTPIDAHKRPDLSPLIKASETVGRALKRGDIVIYESTVYPGATEEDCVPVLEQYSGLRFNHDFYCGYSPERINP GDKTHRLPAIKKVTAGSTPAVAEAVDALYRQIITAGTHPAPSIRVAEAAKVIENTQRDVNIALINELAILFGKLGLDTQA VLEAAGSKWNFLPFRPGLVGGHCIGVDPYYLTHKAQQVGHHPEMILAGRRINDGMGAYVAGQLIKAMLKKGITVQGARVL VLGLTFKENCPDLRNTRVIDVITELKDYGLTVDVHDPWADAACARHEYGLELTATPPSNTYEAIVLAVAHREFRTLGAPA IHALGKEQHVLYDLKHLFHADEADIRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 6e-137 | 64 |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 6e-137 | 64 |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-122 | 60 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Hneap_0232 | YP_003262142.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 2e-137 | 64 |
