Gene Information

Name : Hneap_2269 (Hneap_2269)
Accession : YP_003264130.1
Strain : Halothiobacillus neapolitanus c2
Genome accession: NC_013422
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 2437293 - 2438774 bp
Length : 1482 bp
Strand : -
Note : PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; ATPase AAA; KEGG: azo:azo3356 two component

DNA sequence :
ATGACCGCTTGCCTGATCGTTGATGATGAACTGGATATTCGCACCCTCATTGCCTTGTCGTTGCGCCGTGAAGGCGTGAC
TTGCCATCTGGCCGCCGATCTGGCCAGCGCGCGCGCTCAGTTGGCAGAGTCGGGCCACACGTTAAGTTTTTGTTTGACCG
ACATGCGCTTGCCCGATGGCGATGGGCTTGATCTGCTCGATGAGATTCGCCAGCGGTTTCCCGATTTGCCTGTCGCGGTA
ATTACGGCGCATGGGCAAGTGGACGCGGCCGTGCGCGCCCTCAAGGCAGGCGCATTCGATTTTGTTTCCAAACCGATCGA
GCAATTGGTGCTCAAGCGCCTGTTGCGCGATGCATTAAAGGCCAGAACACTTGATTCGGCTCCTGATCAGTCATCTCAGC
ATGCGTTAGGGTCGAGCGCATCCGGGCAAGACGCGGCGCCCAGAGAAGGTCCTTTCGATGCTGGCCCGAACGCGGCTGAC
ATGGGGCAGGGCGCGGCCAAATCACCATTGATTGGCCCGTCGCGTGCCATGCAGATGCTGCGTGAAACCATTGCCAAGGT
GGCGCGATCTCAGGCACCGGTGTTCATCTGCGGCGAGTCGGGCACAGGCAAAGAGCTGGTGGCGCGACAGATCCATGAAC
TCAGTGGTCGGGCCGACGGCCCTTTCATTCCGGTCAACTGCGGTGCCATTCCGGCTGAATTGATCGAGAGCGAGTTGTTC
GGCCACAAGAAAGGTGCTTTCACGGGCGCGCATCAGGCGCATGAAGGGCTTTTTCGTGCGGCGGAAGGCGGGAGCCTGTT
TCTGGACGAAGTGGCCGATTTGCCGCTGGGTTTGCAGGTCAAGTTGCTGCGCGCCATTCAGGAGCGCAAGGTGCGCCCGG
TGGGTGAGTATGCCGAAGTCCCCATTGATGTGCGCATCATCTCCGCATCGCATCAGGACTTGAATGCGGCGGTGCGCGAT
GGGCGCTTCCGGCACGATTTGTTTTACCGCCTCAATGTGATCGAGCTACGCGTGCCGCCGCTGCGCGCGCGCTTGGAAGA
TCTCCCCGCGCTCTGTGCCCATATCCTGGGCAAGCTGGCTGAGCGCGAGCACCGCCCACCCCCGCACCTCACTCCGGAGG
CATTGAGTTGGCTGGCCCAGCAGTCATTTGAGGGGAATGTTCGGGGATTGGAGAATCTACTGGAGCGGGCCATCGCGTTG
ACCGAGGGTGATCTGCTTGGCGTTTCCGCACTGACCGATTTCCCGGGGGACAATTCGTTTGACTCTTCGGCCGAGCAGAA
TGGTCTTCATTTGGGTTCACCACCGGACGTCAAATCGACTTGGGGCGCTACGCCGCCGAGCAGCGCATTGGAAGCCGAAG
AGCAGCGGCAGGTGCTCAGCGCGCTGGAAATGACCCGGTGGAATCGCAGCGAGGCGGCCCGACGTTTGGGGTTGAGCTTG
CGGCAACTCCGCTATCGGCTGGCCAAATGGGGCGTCGAATAA

Protein sequence :
MTACLIVDDELDIRTLIALSLRREGVTCHLAADLASARAQLAESGHTLSFCLTDMRLPDGDGLDLLDEIRQRFPDLPVAV
ITAHGQVDAAVRALKAGAFDFVSKPIEQLVLKRLLRDALKARTLDSAPDQSSQHALGSSASGQDAAPREGPFDAGPNAAD
MGQGAAKSPLIGPSRAMQMLRETIAKVARSQAPVFICGESGTGKELVARQIHELSGRADGPFIPVNCGAIPAELIESELF
GHKKGAFTGAHQAHEGLFRAAEGGSLFLDEVADLPLGLQVKLLRAIQERKVRPVGEYAEVPIDVRIISASHQDLNAAVRD
GRFRHDLFYRLNVIELRVPPLRARLEDLPALCAHILGKLAEREHRPPPHLTPEALSWLAQQSFEGNVRGLENLLERAIAL
TEGDLLGVSALTDFPGDNSFDSSAEQNGLHLGSPPDVKSTWGATPPSSALEAEEQRQVLSALEMTRWNRSEAARRLGLSL
RQLRYRLAKWGVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 5e-88 48
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 5e-88 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hneap_2269 YP_003264130.1 hypothetical protein BAC0089 Protein 9e-57 41