|
Name : Hneap_1869 (Hneap_1869) Accession : YP_003263738.1 Strain : Halothiobacillus neapolitanus c2 Genome accession: NC_013422 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis protein RibD Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : 3.5.4.26 Position : 2004478 - 2005638 bp Length : 1161 bp Strand : - Note : KEGG: tgr:Tgr7_1559 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding DNA sequence : ATGTCGGCTGAGTTTGTGCAGTCAGGTTTTTCGCCGGATGACACACGCTGGATGCGCGAAGCCTTGGCCTTGGCCGAGCG TGGCCTGACGACGACGCAGCCTAACCCAAGGGTGGGTTGCGTTATCGTTAACGCGGGAGAAGTCGTTGGTCGGGGGTTTC ATGCGCTCGCAGGTGGCCCCCATGCCGAAGTGTTCGCCTTGCAAGAGGCGGGCGAGCGCGCCAAGGGGGCGACCGCCTAC GTCACACTCGAACCCTGCGCGCATGTGGGAAGAACGCCCGCTTGCGCACCGCAATTGGCTGACGCCGGGGTTCGCCGTGT GGTCACCGCCATGACTGATCCCGATCCGCGCGTAGCGGGGGAAGGGCATGCCATTCTGCGCACAGCGGGCGTGCAGGTTG AGTCTGGCTTGCTGGAAGCCGAGGCGCGTTGGCTTAATCGCGGGTTTTTATCCCGTATCGAGCGCGGGCGTCCTTGGGTC ACGGTCAAGATTGCCCAATCGCTTGATGGCCGCACGGCGCTTGCCAATGGCGAAAGCCGCTGGATTACGGGTGAAGCGGC CCGGCACGATGTGCAGTTTCTGCGTGCGCGCCACGCGGCAGTTTTGACCGGCGTGGACACTGTGCTAACCGATGATGCGC GTCTCAATGTGCGGTTATCGCCCGAGGCGCTTGCGATTGACGGCGCTGTGCGCCAACCGTTGCGGGTCGTGCTCGATAGC GGCTTGCGCTTGCCACCGTTCGCACCAATATTTGATGTGCAAGGCGAGGTGCGTATCTACACACGTGATGTGGATGCGGG TATTCATCATGATGGTTTGACCGCGCGGGGCGTTCAATTGGTCGCAGCGCCACAGGCTGAATTTGGTCTGGATCTTGGGT TCATCCTGCGTGATCTGGCCCTGCAGGGCATCAGTGAGGTTCTGGTTGAATCAGGGCCAAAACTGGCGGGTGCCTTTGTC GATCAGGGTTGGGTGGATGAATTGATCATCTATCAAGCGCCGGTGTTGTTGGGGCATAAAGCCCAACCCTGCCTTGATTT GGCATCGCCAATTCGGCTCGATGACGCACCCCGCTGGCAGATTCGGGACACCACGCCAGTGGGGCAGGATATTCGCATCA CGCTGGTGCCACTCGTCGATTCATCCGGTGTTGCTGGATGA Protein sequence : MSAEFVQSGFSPDDTRWMREALALAERGLTTTQPNPRVGCVIVNAGEVVGRGFHALAGGPHAEVFALQEAGERAKGATAY VTLEPCAHVGRTPACAPQLADAGVRRVVTAMTDPDPRVAGEGHAILRTAGVQVESGLLEAEARWLNRGFLSRIERGRPWV TVKIAQSLDGRTALANGESRWITGEAARHDVQFLRARHAAVLTGVDTVLTDDARLNVRLSPEALAIDGAVRQPLRVVLDS GLRLPPFAPIFDVQGEVRIYTRDVDAGIHHDGLTARGVQLVAAPQAEFGLDLGFILRDLALQGISEVLVESGPKLAGAFV DQGWVDELIIYQAPVLLGHKAQPCLDLASPIRLDDAPRWQIRDTTPVGQDIRITLVPLVDSSGVAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 7e-64 | 49 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 7e-64 | 49 |
