Gene Information

Name : Hneap_1804 (Hneap_1804)
Accession : YP_003263674.1
Strain : Halothiobacillus neapolitanus c2
Genome accession: NC_013422
Putative virulence/resistance : Virulence
Product : LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 1940519 - 1941157 bp
Length : 639 bp
Strand : -
Note : PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: ppw:PputW619_3375 LuxR family transcriptional regulator

DNA sequence : 
ATGATTCGCGTGATGCTCGTCGATGATCACACCATGGTGCGCAAGGCATTGGCTCATCTGATTGGAAGCGAGCAGGGCAT
TGGTGTGACATCTGAGGCGGATAGCGGTGAAGCGGCGTTGGCTTTGCTGAAAACCGAAACTGTCGATGTCGTGCTTTGTG
ATATCCACATGCCCGGCATGGGCGGCCTGGAAGCCATCCGGCGTATTCAGGCCCGCTATCCCGAGATCGGTTTGATCGCA
GTAACAGCGGAAGCCGATGCGGCCTTAGCGCGCTCGGTTCTGGAGGCTGGCGTACATGGTTATGTAACGAAAGACGCACC
GCCGCAGGAACTGATCACCGCCATTGAAAACGCCCGTCATAAAATCCGCTTCATTTCATCGCGCATCGCGCAGGAAATCG
CCCTGCAATCCATGCGTAAAACCGCCGATCCTTTCGAAACGCTCTCCGGGCGCGAGCAACAAGTGCTGATGATGATCCTG
GAAGGCAAATCCAACCAGTTCATATCCGACGCACTCTGCGTGAGCCCCAAAACGGTCAGTACCTACAAAGTGCGCTTGCA
GGAGAAACTCGGGGTCAATAACGATATCGAGTTGTTGCGATTGGCCGTGAAATCCGGGCGGGTCGTGATCAACGAATGA

Protein sequence : 
MIRVMLVDDHTMVRKALAHLIGSEQGIGVTSEADSGEAALALLKTETVDVVLCDIHMPGMGGLEAIRRIQARYPEIGLIA
VTAEADAALARSVLEAGVHGYVTKDAPPQELITAIENARHKIRFISSRIAQEIALQSMRKTADPFETLSGREQQVLMMIL
EGKSNQFISDALCVSPKTVSTYKVRLQEKLGVNNDIELLRLAVKSGRVVINE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 4e-34 41
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 4e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hneap_1804 YP_003263674.1 LuxR family transcriptional regulator VFG1889 Protein 5e-36 43