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Name : Hneap_1560 (Hneap_1560) Accession : YP_003263437.1 Strain : Halothiobacillus neapolitanus c2 Genome accession: NC_013422 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1695647 - 1696942 bp Length : 1296 bp Strand : - Note : KEGG: csa:Csal_2315 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like DNA sequence : ATGCTTGACCCCAAGTTAGTTCGCACCGACCCCGAGGCGGTAGCCGCGCAGTTGGCGCGCCGCGGTTTCACGTTCGACGT GGCCCGGTTTGCCGCGCTCGAAAACGAGCGCAAACAGGTTCAGGTCGACACCGAGCAGATGCAAGCCGAACGTAACAGTC GGTCGAAGCTGATCGGCAAGATGAAGGCCGCTGGCGAAGACATTTCCTCCTTGATGGCCGAAATCGGTGGCTTGGGGCAG AAACTCGACCAAGCCAAACAGCGTTTGGGCGAGATTCAATCCGAGCTGGATGCCCTGTTTTCGCTTGTGCCCAATCTACC GGCGGAAGACGTCCCCTTCGGCGAAGATGAAGCCGGAAATATCGAAGTGCGCCGTTGGGGCACGCCCAAAACCTTCGACT TCAACGTTCAGGACCATGTCGCGCTGGGCGCCGCACTCGGGATGAATTTCGAGCAGGCGGTGAAACTGACCGGCTCACGG TTTGTGACCTTGGCCGGTGATCTGGCGCGCCTGCACCGTGCGCTCGCGCAGTTCATGCTCGATCTTCATAGCAACCAGCA CGGTTACACCGAAATGTACGTGCCCTACATCGTCAATGACAAGAGCCTGTTCGGTACCGGTCAGTTGCCCAAATTCGGTG AAGACCTGTTTGCACTAAATGGCGATGCCGATTGGTATCTGATCCCCACGGCTGAGGTACCGCTTACCAATCTGGTTCGT GATGAGTTGTTGTCGGCCAACGATTTGCCCCGCCGTTATGTGGCGCACACACCCAGTTTCCGTGCGGAAGCCGGTGCGGC GGGCCGCGACACTCGGGGGATGATCCGGCAGCATCAGTTCGACAAGGTCGAGTTGGTGCAAATTGTACGGGCTGAGGATT CTGCCGCCGCACTCGAAGCACTGACCAGCCATGCCGAAGCCGTTTTGCAGGCACTTGAATTGCCGTACCGTGTCATGCAG TTGTGCACTGGCGATATGGGCTTCTCGGCGGCGAAAACCTACGATCTGGAAGTGTGGCTGCCGGGCCAGAACACTTATCG TGAAATTTCATCTTGTTCCAACTGCACCGATTTTCAGGCGCGGCGCCTGCAAGCGCGGGTGCGTGATGCCGAAAGCAAGC CGCAGCTCGTGCATACCTTGAACGGTTCGGGCCTGGCCGTTGGTCGCACTTTGGTCGCCTTGCTGGAAAACCACCAACAG GCCGATGGCAGTATCGCGCTGCCACTTGCACTGCGGCCTTACTTTCAGGGCAGAACGGCTATCTGTGTTCCCGAGGGACA GCAGGGTAAAGCATGA Protein sequence : MLDPKLVRTDPEAVAAQLARRGFTFDVARFAALENERKQVQVDTEQMQAERNSRSKLIGKMKAAGEDISSLMAEIGGLGQ KLDQAKQRLGEIQSELDALFSLVPNLPAEDVPFGEDEAGNIEVRRWGTPKTFDFNVQDHVALGAALGMNFEQAVKLTGSR FVTLAGDLARLHRALAQFMLDLHSNQHGYTEMYVPYIVNDKSLFGTGQLPKFGEDLFALNGDADWYLIPTAEVPLTNLVR DELLSANDLPRRYVAHTPSFRAEAGAAGRDTRGMIRQHQFDKVELVQIVRAEDSAAALEALTSHAEAVLQALELPYRVMQ LCTGDMGFSAAKTYDLEVWLPGQNTYREISSCSNCTDFQARRLQARVRDAESKPQLVHTLNGSGLAVGRTLVALLENHQQ ADGSIALPLALRPYFQGRTAICVPEGQQGKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-99 | 54 |
