Gene Information

Name : Hneap_1506 (Hneap_1506)
Accession : YP_003263384.1
Strain : Halothiobacillus neapolitanus c2
Genome accession: NC_013422
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1682
EC number : -
Position : 1631937 - 1632725 bp
Length : 789 bp
Strand : -
Note : PFAM: ABC transporter; KEGG: bpr:GBP346_A3431 capsular polysaccharide export inner-membrane protein

DNA sequence : 
ATGAAATCGACCACGACATTTAAGCAATCCTTTGCCATCCAGTTCCGAGTCATCCACGCCATGATGCTGCGCGAGATGAT
CACCCGGTTCGGGCGCAATAATTTTGGTGTGCTCTGGCTGGTGTTCGAACCGGCGTTGTTTGTCATCTCCATCTCCACGT
TCTGGTATATGTCGGGCATGCATGAGCGTGGAAACATATCGATCGAGGCTTTTGCTGCCACCGGTTACTCTTCGTTGATG
TTATGGCGAAATTCGGCCAATCAGTGCCAACGCGCGTTGAGCGCGAATTCGGCTTTGCTGTACCACCGCCACATTAAGAT
GATTGATATTTATATTACCCGCGTGCTTTTGGAATTTGTCGGGGTTACCGCCGCGTTTATTCTGCTGATGATCGTGTTTA
TTGTTACCGGCTTATCCCCGGCACCGGATGACGTGCTGCGAATGATCACGGCGTGGCTGCTATTGCTTTGGTTCGGCTTT
GGTTTGGGGTTGGTTCTTGGCGCGGCCAGCGAACGGCACGAATTGGTGGGTCGCATCTGGGGCATTATGAGCATGCCTTT
GATGTTTCTCTCCGGCACCTTTTTTATGCTCGATTGGATGCCGCCGGCCATCCGCGAATTATTACTTTGGATCCCGATGG
TCCACGGCGTGGAAATGCTGCGCCATGGCATGTTTGGAGATGCTGTGCCCACCTATTACGATCCCATGTATCTTTTGGGA
TGGGATGCGGGGCTCACCCTGCTGGGCCTTGCCATGATGAAAACAACACGGCAGTACCTCGCGCCATGA

Protein sequence : 
MKSTTTFKQSFAIQFRVIHAMMLREMITRFGRNNFGVLWLVFEPALFVISISTFWYMSGMHERGNISIEAFAATGYSSLM
LWRNSANQCQRALSANSALLYHRHIKMIDIYITRVLLEFVGVTAAFILLMIVFIVTGLSPAPDDVLRMITAWLLLLWFGF
GLGLVLGAASERHELVGRIWGIMSMPLMFLSGTFFMLDWMPPAIRELLLWIPMVHGVEMLRHGMFGDAVPTYYDPMYLLG
WDAGLTLLGLAMMKTTRQYLAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrC NP_273137.1 capsule polysaccharide export inner-membrane protein Not tested IHT-A Protein 3e-33 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hneap_1506 YP_003263384.1 ABC transporter VFG2564 Protein 2e-48 47
Hneap_1506 YP_003263384.1 ABC transporter VFG0685 Protein 5e-36 44
Hneap_1506 YP_003263384.1 ABC transporter VFG0697 Protein 5e-36 44
Hneap_1506 YP_003263384.1 ABC transporter VFG0257 Protein 1e-33 44