Gene Information

Name : Hneap_1505 (Hneap_1505)
Accession : YP_003263383.1
Strain : Halothiobacillus neapolitanus c2
Genome accession: NC_013422
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1134
EC number : -
Position : 1631266 - 1631940 bp
Length : 675 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pmu:PM0781 HexA

DNA sequence : 
ATGAGTATCGTTGTCTCTTCTGTCACTAAACAATACCTTGCCCGTCAAGGCTGGTTTACCGTGTTAAAAGATGTTGATTT
CACGCTTGCCAAGGGTGATCGCTTGGGTATTCTCGGGCGCAATGGCTCAGGCAAATCGACGCTTATTCGCCTGCTGGGTG
GGGTGGAAGCGCCCACATCGGGTTATATTCATGCAGATAAAGATATGCGGATATCTTGGCCGCTAGGCTTCGGTGGTGGT
TTTCAAGGTAGCTTGACGGGGCTTGATAACCTGAAGTTCATCTGCCGAATCTATGGTGAGGATTACCGAAAAAAACGCCC
TTTTGTCGAAGACTTTGCTGAACTGGGCCGTTTTTTCCGAGAGCCGGTAAAAAGTTACTCATCCGGGATGCGGGCTCGAT
TAGCCTTCGGTATTTCCATGGCGATTGATTTTGATTGCTATTTGATTGACGAGGTTCTGGCAGTTGGGGATCAGCGTTTC
AAAGATCGATGCCGAGATGAAATGCTCGAGAAAAAAGAAAATAAAAGCTTGATACTGGTGTCCCACTCCATAGCGAGCCT
CAAAGAGTATTGCAACCGTTTTTGCGTGCTCACAGACGGCGAATTAACGCATTTTGACTCGCTGGATGAGGCGCAAAAAT
TTCATATGGCGCATATTCAGCGTCAAAAAGAATAA

Protein sequence : 
MSIVVSSVTKQYLARQGWFTVLKDVDFTLAKGDRLGILGRNGSGKSTLIRLLGGVEAPTSGYIHADKDMRISWPLGFGGG
FQGSLTGLDNLKFICRIYGEDYRKKRPFVEDFAELGRFFREPVKSYSSGMRARLAFGISMAIDFDCYLIDEVLAVGDQRF
KDRCRDEMLEKKENKSLILVSHSIASLKEYCNRFCVLTDGELTHFDSLDEAQKFHMAHIQRQKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 2e-54 58
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 1e-40 48
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 3e-38 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hneap_1505 YP_003263383.1 ABC transporter VFG0258 Protein 6e-55 58
Hneap_1505 YP_003263383.1 ABC transporter VFG0696 Protein 2e-52 56
Hneap_1505 YP_003263383.1 ABC transporter VFG2563 Protein 4e-47 54
Hneap_1505 YP_003263383.1 ABC transporter VFG1449 Protein 1e-38 46