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Name : Hneap_0143 (Hneap_0143) Accession : YP_003262054.1 Strain : Halothiobacillus neapolitanus c2 Genome accession: NC_013422 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 139777 - 141000 bp Length : 1224 bp Strand : + Note : TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system F domain; KEGG: tgr:Tgr7_0227 general secretion pathway protein F DNA sequence : ATGGCAGCTTTTGAATACAGCGCGCTGGATGCCCAAGGCAAAACCCGCAAGGGCGTGATTGAAAGCGACAGCGCGCGCGG TGCCCGCAGCCTGTTGCGCGATCAGGGCTTGGCGCCGCTGACCATTGAAGCGGTAGTGGCCGATCAATCCACCGCTGGCG GCATGCAAGGCTGGATGAGCCGTTTTCAATCCTTGAATCCAACGGAACTGGCTCTGTTCACCCGCCAGATTTCCACCTTG ATTGCCGCCGGCCTGCCCATCGATGCGGCGCTGTCGGGGATTATTCGGCAAACGGAAAACCCAAGAATCCGCCGCATTGT CACGGCGGTGCGCTCAAAAGTGGTTGAAGGGCACAGCCTTGCGCAGGGGCTGGCGACGTTTCCGCGCGCCTTCTCGGAAC TGTACCGCGCGACGGTTGCCGCCGGTGAAGAATCGGGCCATCTCGAAGCGGTGCTCGAACGCCTGGCCGATTACACCGAA GGGCGTCAGGCCACCACGCAAAAGGTGCAGATGGCGCTGTTTTATCCCGCATTGCTCACCTTGATGGCCGTGGCGGTAGT TATTGGCCTCGTGACGTATGTTGTGCCGCAAGTGGTGCAAGTCTTCGTGCAGATGAAACAAACGCTGCCACCGCTGACCC GCGGATTGATTGCGGTGAGCGCCTTTTTGCGAGAACAATGGCCGTGGATTTTATTGGGTATGGCGGCCTTTGCTATTTGG TTTTACTGGGCGCTGCGCCAACCAAAATTCGCTTTTCGTTGGGCGCAGATTCAACTTAAATTGCCGCTGATCGGTCGATT GATTCGTGGCTTCAATGCCGCCCGGTTCGCTCGCACGTTGAGCATCCTGAGCGCCGCCGGCGTGCCGATGCTCAAGGCGC TGACCATCAGTGGCGAGGTGGTTGCTTCTGAGCCGATGCGCCGCGCTATTAAAGAGGCCACCGACCGCGTGCGTGAGGGC GCGCCGATTGCCCGTTCGCTGGAGCAGTCGCGTTTATTTCCGCCGATGATGTTGCAATTGATCGCGGCGGGCGAGCAAAG CGGCGCCTTGGGCAATATGCTCGAACGGGCCGCCGTGCAGCAGGAGCGTGAACTCGATACCCTGATCAACGCCTTGCTCG GCCTGTTCGAGCCGATTTTGATTCTCGTCATGGGCGGGGTCGTTTTGCTGATCGTGCTGGCGATCCTGATCCCGATTTTT GATCTCAACCAAATGGTGCATTAG Protein sequence : MAAFEYSALDAQGKTRKGVIESDSARGARSLLRDQGLAPLTIEAVVADQSTAGGMQGWMSRFQSLNPTELALFTRQISTL IAAGLPIDAALSGIIRQTENPRIRRIVTAVRSKVVEGHSLAQGLATFPRAFSELYRATVAAGEESGHLEAVLERLADYTE GRQATTQKVQMALFYPALLTLMAVAVVIGLVTYVVPQVVQVFVQMKQTLPPLTRGLIAVSAFLREQWPWILLGMAAFAIW FYWALRQPKFAFRWAQIQLKLPLIGRLIRGFNAARFARTLSILSAAGVPMLKALTISGEVVASEPMRRAIKEATDRVREG APIARSLEQSRLFPPMMLQLIAAGEQSGALGNMLERAAVQQERELDTLINALLGLFEPILILVMGGVVLLIVLAILIPIF DLNQMVH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 9e-63 | 44 |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 6e-63 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Hneap_0143 | YP_003262054.1 | general secretion pathway protein F | VFG0181 | Protein | 1e-76 | 50 |
| Hneap_0143 | YP_003262054.1 | general secretion pathway protein F | VFG2049 | Protein | 5e-64 | 43 |
| Hneap_0143 | YP_003262054.1 | general secretion pathway protein F | VFG1870 | Protein | 2e-68 | 43 |
