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Name : Hneap_0142 (Hneap_0142) Accession : YP_003262053.1 Strain : Halothiobacillus neapolitanus c2 Genome accession: NC_013422 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 138262 - 139770 bp Length : 1509 bp Strand : + Note : KEGG: tgr:Tgr7_0226 general secretory pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: ATPase AAA DNA sequence : ATGACTGTGGACGCTGATACCCACGCCCATCTGGCCAAAACGTCGCCGCTGTCGTACGGCTACGCACGTCGTTTTGGCGT GCTGATCGAGCCGGATACAACCGCCGAGGCAGCCTGGATCGTGCGGCATTGCAAGCCGTTGCCGGTATCGGTGTTGGCCG AGCTGGGGCGCAAACTGCCCGATGGCTTTACGCTGGACTGGCTTGAAACTGATGAGTTTGAACGCCGCTTGGCGCGCGCC TATGAAGGCGGTTCGAGCGTGGCACAAACCATGGTCGATGATTTGGGCGACGGCGGGCTCGATGCGCTGGCCAACACCTT GAACACGCCGATCGACCTGCTCGAAGCCGACGACGAAGCACCGATCATTCGCCTGATCAATGCGCTGCTTTCCGAAGCCG TGCGCGAGGGTGCATCCGATATTCATCTGGAAAGCTTCGAAAGCCGCATGGTGGTGCGTTTTCGCGTCGATGGCATGTTG CGCGAGGTGCTCGAACCACCGCGTGCCGTGGCCGGTATCATCGTCTCGCGGATCAAGGTGATGGCGAACCTTGATATTGC CGAAAAACGCGTGCCGCAGGATGGTCGTATCTCGCTGCGTTTGGCCGGTCGCCCGGTCGATGTGCGTGTATCAACCCTGC CTTCGGGCCAAGGTGAACGCGTCGTGTTGCGCCTGTTGGACAAAGAAGCCGGGCGCTTGACGCTCGATAACCTGGGGTTA ACGCGCGAACTGCAAGCTCGGCTGAACAAGCTCATCCACCGGCCGCACGGCATTTTGCTCGTGACCGGTCCGACCGGCTC GGGCAAGACCACCACGCTGTATGCCGCGCTGTCGGAGATCAACACCCGCGAGCGCAACATTCTCACCGTCGAAGACCCGA TTGAGTATTACCTCGACGGCGTGGGTCAAACGCAGGTCAATCCCAAGGTGGAGATGACCTTCGCGCGCGGTTTACGGGCG ATTTTGCGCCAAGATCCAGACGTGGTGATGGTCGGTGAGATTCGCGATGTCGAAACCGCCGAAATTGCGGTTCAGGCCAG CTTGACCGGCCACTTGGTGCTCTCGACCTTGCACACCAACTCCGCCATTGGCGCGATCACGCGGCTGCGCGATATGGGTG TTGAACCGTTTTTACTCTCATCGAGCCTGATCGGCGTGCTGGCGCAACGCTTGGTGCGCCGCCTCGATGCCCGTTACCGT GAAGCCTACACGCCCGATGCGAGCGAATGCGCGCTGCTCGGCTTGGATGCCAGCCAACCGCCGACGTTGTATCGGGTGAG TGAAGAAGCGCGGCAGCGCGGCCAGGGTTATCTCGGTCGAACCGGCGTGTATGAGCTGATCAGCATTGATGCCGACACGC GACGTTTAATCCACGATGGCGCCGCGGAACCGGCCATCGAAGCGCAAGTCCGCAAGCACAGCAGCTCCATTCTGGCCTAT GGCGCGGCCCTCGTGATGGCCGGCGTCACCACCACAGAAGAATTACTCCGCGTGACGGCGGAAGGGTAA Protein sequence : MTVDADTHAHLAKTSPLSYGYARRFGVLIEPDTTAEAAWIVRHCKPLPVSVLAELGRKLPDGFTLDWLETDEFERRLARA YEGGSSVAQTMVDDLGDGGLDALANTLNTPIDLLEADDEAPIIRLINALLSEAVREGASDIHLESFESRMVVRFRVDGML REVLEPPRAVAGIIVSRIKVMANLDIAEKRVPQDGRISLRLAGRPVDVRVSTLPSGQGERVVLRLLDKEAGRLTLDNLGL TRELQARLNKLIHRPHGILLVTGPTGSGKTTTLYAALSEINTRERNILTVEDPIEYYLDGVGQTQVNPKVEMTFARGLRA ILRQDPDVVMVGEIRDVETAEIAVQASLTGHLVLSTLHTNSAIGAITRLRDMGVEPFLLSSSLIGVLAQRLVRRLDARYR EAYTPDASECALLGLDASQPPTLYRVSEEARQRGQGYLGRTGVYELISIDADTRRLIHDGAAEPAIEAQVRKHSSSILAY GAALVMAGVTTTEELLRVTAEG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-127 | 59 |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-127 | 59 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Hneap_0142 | YP_003262053.1 | general secretory pathway protein E | VFG0182 | Protein | 6e-131 | 61 |
| Hneap_0142 | YP_003262053.1 | general secretory pathway protein E | VFG2048 | Protein | 6e-127 | 58 |
| Hneap_0142 | YP_003262053.1 | general secretory pathway protein E | VFG1876 | Protein | 5e-111 | 52 |
| Hneap_0142 | YP_003262053.1 | general secretory pathway protein E | VFG2426 | Protein | 4e-62 | 46 |
