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Name : Hneap_1227 (Hneap_1227) Accession : YP_003263110.1 Strain : Halothiobacillus neapolitanus c2 Genome accession: NC_013422 Putative virulence/resistance : Unknown Product : integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 1328397 - 1329890 bp Length : 1494 bp Strand : - Note : PFAM: integrase; KEGG: mdi:p1METDI0044 transposase of ISMdi27, IS21 family (ORF 1) DNA sequence : ATGGAAACCATCGGCAAGATTCGCCGTCGACATCATGTGGGCGGGGAGAGCATCAGTGCCATCGCCCGTTCTTTGAATCT CTCACGTAACACGGTCAAGAAGTATCTGAATGCCCAAGCCGAACCGGCTTATCGGCGATCAGTCCAACCCAAACCGCAAC TCGGTGCTTTCTCGGTCCTGATCGAGCAATGGCTGGTCTCGGATGCGGCCTTGCCCAAGGCCCGGCGGCGCACCGCCCGT CGGTTGTTTGAGGGCTTGCAGGCGGCGGGCTATCACGGGGCGTATGACAGTGTTCAGCGCCATGTGAAGGCGTGGAAAGC GGCGGCTTCGGTGCGTGGTGCTGTTACGCAGGCCTTTGTACCGCTGTCATTTGCGCCCGGTGAAGTCGGTCAGTTCGACT GGAGTTACGAATATGTGGTGCTCGGCGGTGTGACGCAGACGATCAAGCTGGCGCACTTTCGCCTGGCTCATAGCCGGGCG ATGTTTGTGGTCGCCTATCCCCGTGAGACGCAGGAGATGGTACTGGATGCCCATGATCGGGCATTCGCCTTCTTCGGCGG CGTGCCGCAGAAGATGATCTACGACAACCTCAAGACGGTGGTCGATGCGGTGTTCAGTGGCAAGGAACGCCAGTTCAATC GGCGCTTTCTGGCGCTGGCCAATCATTACCTGTTCGAGCCGGTGGCGTGTACCCCTGCCTCGGGCTGGGAGAAGGGGCAG GTCGAGAATCAGGTGGGCAACATTCGGGAGTGGTTATTCACCCCAACGCCCCGCTTTGCCGACTTCAAGGAACTGAACGC CTGGCTTGAGCAGCGATGCCGTGAGCTGGCCGAGCGTGTGCATCCTGACAAGCAGGGAACCATCGCCGAGGCTTGGGCGG CGGAGCGACCGGCGCTGCGGCCGGTCAGCATGCCGTTCCATGGTTATGTCGAGCAACCACTACGCGTGTCCAGTACCTGT CTCATTTCAGTCGATCGCAATCGCTACAGCGTGCCGGCCGCCTGGGCGGGCAAAGTGGTTTCAGTGCGCATCAGCGCCAC TCATGTGCGGGTCGCTGCCGAGGGGAATATGATTGCCGAACATGAGCGCCTGTTTGGGCGGGATCAACTGGCCTGCCAGC CATGGCACTATGTGCCGATCCTTGAAACCAAGCCCGGGGCACTGAGGCATGGTCAGCCCTTCATCGAATGGCAGCTACCT TTGGCCATCGGGGTGGTGCGCACCTTTCTGCTCAAGCAGCCCAAGGGTGACCGGGCCTTCGCCGATCTGTTGCTAGCCGC CCGCAGCAGCGGGCTCGAAGCACTTGATGTGGCCTGTCAGTTGGCCTTGGAGCATGGGCACCCCCATGCCTCGGTGGTGC TCAACGAGTTACGTCGCCTGACCGAACCGACGCATCGTCCGATCATGGAGGTTCCTGTCGCCCTGATTCTGCGCAATGAG CCAGCCGCCAACTGCGGTCGCTATGACAGTCTGCTGGGAGGATGCCATGTCTGA Protein sequence : METIGKIRRRHHVGGESISAIARSLNLSRNTVKKYLNAQAEPAYRRSVQPKPQLGAFSVLIEQWLVSDAALPKARRRTAR RLFEGLQAAGYHGAYDSVQRHVKAWKAAASVRGAVTQAFVPLSFAPGEVGQFDWSYEYVVLGGVTQTIKLAHFRLAHSRA MFVVAYPRETQEMVLDAHDRAFAFFGGVPQKMIYDNLKTVVDAVFSGKERQFNRRFLALANHYLFEPVACTPASGWEKGQ VENQVGNIREWLFTPTPRFADFKELNAWLEQRCRELAERVHPDKQGTIAEAWAAERPALRPVSMPFHGYVEQPLRVSSTC LISVDRNRYSVPAAWAGKVVSVRISATHVRVAAEGNMIAEHERLFGRDQLACQPWHYVPILETKPGALRHGQPFIEWQLP LAIGVVRTFLLKQPKGDRAFADLLLAARSSGLEALDVACQLALEHGHPHASVVLNELRRLTEPTHRPIMEVPVALILRNE PAANCGRYDSLLGGCHV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| istA | AAN62228.1 | putative transposase | Not tested | PAGI-3(SG) | Protein | 3e-151 | 64 |
| unnamed | AAN85144.1 | unknown | Not tested | Hrp PAI | Protein | 2e-87 | 45 |
| EC042_4098 | YP_006098381.1 | transposase | Not tested | Tn2411 | Protein | 1e-85 | 43 |
