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Name : Hneap_1003 (Hneap_1003) Accession : YP_003262886.1 Strain : Halothiobacillus neapolitanus c2 Genome accession: NC_013422 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 1083682 - 1085103 bp Length : 1422 bp Strand : + Note : KEGG: noc:Noc_0223 DnaB helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase; SMART: ATPase AAA DNA sequence : ATGACGACCGATTTTAAGCTTCCCGCACGCACGCAAAACAACACCTCATCGGTGTCTGAAGCCTTCTCCAATGTGCGTAT GCCGCCGCATTCCCAAGATGCGGAGCAGGCCGTACTGGGGGGGCTGATGCTGGATCATCTCGCGCTGGAAAAAATCAGCG ATGTGCTGCGTCCGGAAGATTTCTACCGCGCCGATCACCGCAAGGTGTATGAGGCCATTCTGGATCTGTCCGAAGGCAAC AAGCCCTTCGATGCGGTGATGGTGGCCGAGTGGCTTTCCAAGCGCGATCAGCTTGAAGAGGCGGGCGGCGTACCTTATCT GGTCGAACTGGTTGAAGCCGTACCCACGGCAGCCAACATTCTGGCCTACGCACAGATGATCCGCGAAAGCTCGGTGCTGC GCAAACTGATCGACGTGGGTACACAGGTCGTGCAAATGGGCTATCGCCCGGAAGGTCGCGCGGCGGCCGAAGTCATGGAA TTTGCCGAACGCGAGATTTTCTCGATCGCCGATGAAGGCGAGCGTCTCAAGCGCGGTTTCAGGCCCATCAAGGAACTGAT GACCGGTGCCATGGATCGGGTGGCCGAACTCTTCGAGCGTGAAGAGGCGATTACCGGTCACGCCACGGGCTTCAAGGACT TCGATGAAATGACATCCGGCCTTCAGGCGGGCGATCTGGTGATCGTTGCCGGTCGTCCATCGATGGGCAAGACCACCTTC GCCATGAATATTGCCGAACACGTCGCGATTTCCGGCAAAAAGGCGGTGGCGGTGTTTTCGATGGAAATGCCCGGCGAACA ACTGGCGCTGCGTATGCTCAGCTCAATCGGCCGTGTTGATCAAACCCGAGTGCGAACAGGTCGGCTCGACGATCAGGATT GGCATCGCCTCACCTCCGCCGTGGGTATTCTGAGTCAGACACAAATTCATATCGACGATACCCCCGCACTGTCGCCCAGT GATTTGCGTTCGCGGGCGCGGCGACTGGCGCGCACCTGTGACTTGGGGGTGATCGTGGTCGATTACCTACAGCTCATGCA GGTGCCGGGCACGAAGGAAAACCGCACCAACGAAATCTCCGAGATTTCCCGCTCGCTCAAATCCATCGCGAAAGAACTCA GCGTACCTGTGATTGCACTGTCGCAGCTCAACCGCTCCCTGGAACAGCGCCCGAACAAGCGTCCGGTCATGTCGGATCTG CGTGAATCCGGTGCCATCGAGCAGGATGCCGATTTGATTGTGTTCATCTACCGCGATGAGGTCTACGACAAGGAATCGCC ACAGAAGGGCATGGCAGAAATCATTATCGGCAAGCAGCGTAACGGCCCCATCGGTAATCTATTTCTTACCTTCCGTGGGC AGAACACCCGCTTTGAAGATTACATACCCAATGACGTGCTGCCGGAGGGCTATCACTCATGA Protein sequence : MTTDFKLPARTQNNTSSVSEAFSNVRMPPHSQDAEQAVLGGLMLDHLALEKISDVLRPEDFYRADHRKVYEAILDLSEGN KPFDAVMVAEWLSKRDQLEEAGGVPYLVELVEAVPTAANILAYAQMIRESSVLRKLIDVGTQVVQMGYRPEGRAAAEVME FAEREIFSIADEGERLKRGFRPIKELMTGAMDRVAELFEREEAITGHATGFKDFDEMTSGLQAGDLVIVAGRPSMGKTTF AMNIAEHVAISGKKAVAVFSMEMPGEQLALRMLSSIGRVDQTRVRTGRLDDQDWHRLTSAVGILSQTQIHIDDTPALSPS DLRSRARRLARTCDLGVIVVDYLQLMQVPGTKENRTNEISEISRSLKSIAKELSVPVIALSQLNRSLEQRPNKRPVMSDL RESGAIEQDADLIVFIYRDEVYDKESPQKGMAEIIIGKQRNGPIGNLFLTFRGQNTRFEDYIPNDVLPEGYHS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 1e-88 | 48 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 7e-81 | 45 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 8e-79 | 45 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 6e-76 | 44 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 2e-75 | 44 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-75 | 44 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-75 | 44 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 2e-74 | 43 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 3e-62 | 42 |
