Gene Information

Name : Pecwa_0951 (Pecwa_0951)
Accession : YP_003258376.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Virulence
Product : TonB-dependent siderophore receptor
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1629
EC number : -
Position : 1023560 - 1025758 bp
Length : 2199 bp
Strand : +
Note : TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cko:CKO_00969 hypothetical protein

DNA sequence :
ATGATAACCAAAAAGCATACGCTCTGGGCCCTTAACCCGTTGTTGCTCGCCATGATGGCGCCAGCGGTCGCACAGCAGAG
CAGTGACGACACGTTAGTGGTTTCCGCCAACCGCACCAACCGTACGGTGGCGCAAATGGCGCAAACCACGTGGGTGATTG
AAAAAGCCGAACTGGAGCAGCAGATCCAGGGCGGTAAAGAGCTGAAAGACGCACTGGCTCAGTTGATCCCCGGTCTTGAC
GTCAGCAGCCAGAGCCGTACCAACTACGGGATGAACGTGCGTGGCCGTCCGCTGGTCGTGCTGGTGGACGGCGTGCGTCT
GAACTCGTCGCGCACCGACAGCCGCCAACTCGATTCCATCGACCCGTTCAATATCGACCACGTTGAAGTGATCTCCGGGG
CCACCGCGCTGTACGGTGGCGGTAGTACCGGCGGCCTTATCAATATTGTGACTAAAAAAGGCCAGCCGGATACCCAGATG
GAGTTTGAGACGGGGATCAAGAGCGGTTTCAACAGCAGTAAGGATCACGATGAGCGCGTTGCCAGCGCCATCTCCGGCGG
CAACGACCGTATCTCCGGGCGCGCATCGGTGGCGTACCAGAAGTTCGGCGGCTGGTTTGACGGTAACGGCGACGCGACTC
TGCTCGATAACACCCAGACTGGCCTACAGTATTCCGACCGTCTGGACGTGATGGGCACCGGGACGCTGAATATCGATGAT
ACCCAACAGCTTCAGTTGGTTACCCAATATTATAAAAGCCAGGGTGACGACGATTACGGGCTGAACCTCGGGAAAGATTT
TTCGGCAATCAGCGGCGCGACCAAGCCATACGTCAGTAGCGGCCTGCATTCAGACCGTATTCCGGGCACCGAGCGTCATC
TCATCAGCCTGCAATACTCGAATAGCGATTTCCTCGGTCAGGAACTGGTCGGCCAGGTCTATTACCGCGATGAATCGCTG
CTGTTTTATCCGTTCCCGACCGTCAACGCGAACAAACAGGCCACCGCGTTCTCCTCATCGCAGCAGGACACTGACCAGTA
TGGCGCGAAGCTGACCCTCAACAGCGAACCGCTGGACGGCTGGCAGTTGACCTACGGGCTGGATGCGGATCACGAGCGCT
TTACCTCTAACCAGATGTTCTTCGATCTGGCCCAGGCAAACGCTTCCGGCGGGATGAACAACAAGCGGATTTACACCACC
GGACGCTATCCGGGGTATGACATCACTAACCTGGCGACCTTCCTGCAATCCAGCTATGACATCAATGATATCTTTACCCT
GAGCGGCGGTGTGCGCTATCAGTACACCGAGAACAAGATTGATGATTTCATTGGCTACGCGCAGCAACAGCAGATTGCCG
CCGGGAGGGCGCAGTCCGCCGATGCGATCCCGGGCGGGTCGGTCGATTACGACAACTTCTTGTTTAACGCCGGTCTGCTG
GTTCATCTGACCGAACGCCAGCAGGCGTGGTTCAATTTCTCCCAGGGCGTGGAGCTGCCGGATCCGGGTAAATACTACGG
GCGCGGCACCTATGGCGCAGCGGTGAACGGGCACCTTCCGCTGACCAACAGCGTGAACGTGAATGACAGCGAACTGGAAG
GCGTGAAGGTCGACTCCTACGAGCTGGGCTGGCGCTTCTCCGGCGATAACCTGCGTACGCAAATCGCGGCCTACTACTCG
ATTTCCGATAAGAACGTGCAGGCAAATAAAGACCTGACCATCAGCGTGGTCGATGACAAGCGCCGCATCTACGGCGTGGA
AGGCGCGGTGGACTACTTTATCCCGGACACCGATTGGAGCACCGGTGCGAACTTCAACGTGCTGAAAACCGAGTCTAAAG
TGAACGGTAGCTGGGAAAAGTATGATGTGAAGGTGGCGAGCCCGTCGAAAGCAACGGCCTACATCGGTTGGGCACCGGAT
CCGTGGAGCCTGCGCGTACAGAGCACCACTTCCTTCGACGCCAGCGACGCTCAGGGCTACAAAATCGATGGTTACACCAC
GGTTGATCTGCTCGGTAGCTATGATCTGCCGGTGGGTAAACTTAGCTTCAGCGTGGAGAACGTTTTCGATCGCGACTACA
CCACCGTCTGGGGCCAGCGTGCGCCGCTGTACTACAGCCCGGGCTACGGTCCTGCGTCGCTGTACAACTATAAAGGGCGT
GGCCGCACCTTTGGCTTGAACTACTCACTGCTGTTCTAA

Protein sequence :
MITKKHTLWALNPLLLAMMAPAVAQQSSDDTLVVSANRTNRTVAQMAQTTWVIEKAELEQQIQGGKELKDALAQLIPGLD
VSSQSRTNYGMNVRGRPLVVLVDGVRLNSSRTDSRQLDSIDPFNIDHVEVISGATALYGGGSTGGLINIVTKKGQPDTQM
EFETGIKSGFNSSKDHDERVASAISGGNDRISGRASVAYQKFGGWFDGNGDATLLDNTQTGLQYSDRLDVMGTGTLNIDD
TQQLQLVTQYYKSQGDDDYGLNLGKDFSAISGATKPYVSSGLHSDRIPGTERHLISLQYSNSDFLGQELVGQVYYRDESL
LFYPFPTVNANKQATAFSSSQQDTDQYGAKLTLNSEPLDGWQLTYGLDADHERFTSNQMFFDLAQANASGGMNNKRIYTT
GRYPGYDITNLATFLQSSYDINDIFTLSGGVRYQYTENKIDDFIGYAQQQQIAAGRAQSADAIPGGSVDYDNFLFNAGLL
VHLTERQQAWFNFSQGVELPDPGKYYGRGTYGAAVNGHLPLTNSVNVNDSELEGVKVDSYELGWRFSGDNLRTQIAAYYS
ISDKNVQANKDLTISVVDDKRRIYGVEGAVDYFIPDTDWSTGANFNVLKTESKVNGSWEKYDVKVASPSKATAYIGWAPD
PWSLRVQSTTSFDASDAQGYKIDGYTTVDLLGSYDLPVGKLSFSVENVFDRDYTTVWGQRAPLYYSPGYGPASLYNYKGR
GRTFGLNYSLLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iutA YP_002414042.1 Ferric aerobactin receptor Virulence Not named Protein 0.0 87
iutA NP_839219.1 ferric siderophore receptor Virulence SHI-2 Protein 0.0 86
iutA NP_709458.2 ferric siderophore receptor Virulence SHI-2 Protein 0.0 86
iutA AAD44750.1 IutA Virulence SHI-2 Protein 0.0 86
iutA AAK71635.1 IutA Virulence SHI-3 Protein 0.0 86

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pecwa_0951 YP_003258376.1 TonB-dependent siderophore receptor VFG0936 Protein 0.0 87
Pecwa_0951 YP_003258376.1 TonB-dependent siderophore receptor VFG0619 Protein 0.0 86
Pecwa_0951 YP_003258376.1 TonB-dependent siderophore receptor VFG1085 Protein 0.0 86