Gene Information

Name : Pecwa_0950 (Pecwa_0950)
Accession : YP_003258375.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Virulence
Product : L-lysine 6-monooxygenase
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG3486
EC number : 1.14.13.59
Position : 1022197 - 1023531 bp
Length : 1335 bp
Strand : +
Note : KEGG: cko:CKO_00970 hypothetical protein

DNA sequence :
ATGACAAACACTGTAGATTTCATTGGCGTAGGCATTGGCCCGTTTAACCTGAGCATCGCGGCGCTAGCCCATGAAGCGGA
AGGCTTCAGCAGCCGCTTCTTCGACGGCCGCACGCAGTTTGCCTGGCATCCGGGGATGCTGGTGCCGGACTGCCATATGC
AGACCATGTTCCTGAAAGATCTGGTGAGCGCCGTCGCGCCGACCAGCCCGTACAGCTTTGTGAACTATCTGGTGAAGCGC
AAGAAATTCTATCGCTTCCTGACCACCGAGTTGCGCACCGTTTCCCGCGATGAGTTCTCCGACTACCTGCGCTGGGCCGC
CGAAGGAATGGAAAACCTGCGTTTCAACAATACGGTGGAACGCATCGCGTTTGACGATCGTCGCCAGCTTTTCGCCGTAC
AAACCTGCGAGGGAGAAACCTTCGCCCGCCACGTCTGCCTGGGCATTGGCAAACAGCCGCATCTGCCGGCCTGCGTGAAA
AGCGTTTCGCCAACCTGCTTCCACGCCAGCGAAATGAGCCTGTGCCAGCCCAACCTGAGTGGTAAGCGGGTGGCGGTGGT
CGGCGGCGGGCAAAGCGGCGCGGACCTGTTCCTCAACGCTCTGCGCGGGGAATGGGGCGAAGTTGCTGAGATTAGCTGGG
TGTCGCGTCGCAATAACTTTAACGCGCTGGATGAAGCGGCGTTCGCCAATGAATATTTCACCCCGGAGTACGTGTCCGGC
TTCGTCGGGTTGAATCACGCCGCGCGCCAGAAGATGCTCGACGAGCAGAAAATGACCTCTGACGGTATTACTGCCGAGTC
GCTGCTGACGATTTATCGCGAGCTGTACCACCGCTTCGAGGTGCTCGGCCTGCCGCGTAATGCCCATCTGATGCCGAGCC
GTTCGGTCACCGGTCTTGAAAGCCGTGACCAGGGCTGGCAACTGCTGCTGGAGCATCATTTGGATAAAGGCTACGACACG
CTGGAGAGCGACGTGGTGATTTTCGCCACCGGCTACCGCCCTGCGCTGCCGCAGATGCTGTCGCCGCTGATGCCGCGTAT
TGCTATGCGCGATGAGTGCAGCTTCAACGTGCGGGACGATTTCACCATCGAGTGGGACGGCCCGAAAGAGAATCACCTGT
TCGCCGTTAACGCCAGCATGCAGACCCACGGTATTGCCGAGCCGCAGCTTAGCCTGATGGCGTGGCGCGCCGCCCATATT
CTGAATTGCGCGATGGGGCGCGATTTGTTCGATCTCAGTACGCCGCCCGCGCTGATTCAGTGGCGCAGCGGCAGCCGGGA
AAAACCGCAGCCGGAGGCTGCTCCTCTGACTCGCTACACAGCATCTTTGGGCTGA

Protein sequence :
MTNTVDFIGVGIGPFNLSIAALAHEAEGFSSRFFDGRTQFAWHPGMLVPDCHMQTMFLKDLVSAVAPTSPYSFVNYLVKR
KKFYRFLTTELRTVSRDEFSDYLRWAAEGMENLRFNNTVERIAFDDRRQLFAVQTCEGETFARHVCLGIGKQPHLPACVK
SVSPTCFHASEMSLCQPNLSGKRVAVVGGGQSGADLFLNALRGEWGEVAEISWVSRRNNFNALDEAAFANEYFTPEYVSG
FVGLNHAARQKMLDEQKMTSDGITAESLLTIYRELYHRFEVLGLPRNAHLMPSRSVTGLESRDQGWQLLLEHHLDKGYDT
LESDVVIFATGYRPALPQMLSPLMPRIAMRDECSFNVRDDFTIEWDGPKENHLFAVNASMQTHGIAEPQLSLMAWRAAHI
LNCAMGRDLFDLSTPPALIQWRSGSREKPQPEAAPLTRYTASLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucD AAD44749.1 IucD Virulence SHI-2 Protein 1e-169 76
iucD NP_839220.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 2e-169 76
iucD NP_709457.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 2e-169 76
iucD YP_002414043.1 L-lysine 6-monooxygenase Virulence Not named Protein 4e-170 76
iucD AAK71634.1 IucD Virulence SHI-3 Protein 1e-168 76

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pecwa_0950 YP_003258375.1 L-lysine 6-monooxygenase VFG0937 Protein 2e-170 76
Pecwa_0950 YP_003258375.1 L-lysine 6-monooxygenase VFG0618 Protein 8e-170 76
Pecwa_0950 YP_003258375.1 L-lysine 6-monooxygenase VFG1084 Protein 6e-169 76