Gene Information

Name : Pecwa_0949 (Pecwa_0949)
Accession : YP_003258374.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Virulence
Product : IucA/IucC family protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4264
EC number : -
Position : 1020460 - 1022193 bp
Length : 1734 bp
Strand : +
Note : PFAM: IucA/IucC family protein; KEGG: cko:CKO_00971 hypothetical protein

DNA sequence :
ATGAACCGTATGGACTGGGAAATTGTTAACCGCCAGTTGGTGGCGAAAATGCTGGCTGAACTGGAATACGAACAGGTCTT
TCACGCCGAGTCTCTGGGCGATGACCGTTACGCGATTAATCTGCCGGGCGCGGAGTGGCACTTCAGCGCACAGCGCGGGA
TCTGGGGCTGGCTGTGGATCGACCATGAAACGCTGCGCTGCGCCGATGAGCCCGTTGTTGCACAGACGCTGCTGATGCAG
CTAAAGCCGGTGCTGTCGATGAGCGATGCCACCGTCGCCGAGCATATGCAGGATCTCTACGCTACGCTGCTGGGCGACCT
GCAACTGCGCAACGCACGTCGCGGCATGAGCGCGGAAGATCTTATCGCGCTGGACGCCGATCGGTTGCAGTGCCTGCTCA
GTGGTCATCCAAAATTCGCCTTTAATAAGGGCCGCCGTGGCTGGGGACGGGACGCGCTGACGCGCTATGCCCCGGAGTAC
GCCAATACCTTCCAGCTTCATTGGCTGGCGGTGAAACGCGACAACATGGTCTGGCGCTGCGACAGCGCGCTGGACAGCGA
ACAACTGCTGACGGCGGCGATGGACCCGCAGGAGTTGGCCCGTTTCCATCAGGCCTGGCAGGCGCGCGGGCTGGACAAGA
GCTGGCTCGCGTTGCCGGTGCATCCGTGGCAGTGGCAGCAAAAAATCGCCCTCGATTTCGTTGCCGATCTGGCTGAGGGC
CGCATGGTGTCGCTGGGTGAATTTGGCGACCGCTGGCTCGCCCAGCAGTCGCTGCGCACCCTGACCAACGCCAGCCGCCA
GGTCGGGCTGGATATCAAACTGCCGCTGACGATTTACAACACCTCCTGCTATCGCGGCATTCCGGGCAAATATATTGCCG
CCGGGCCGCTGGCCTCGCGCTGGCTTCAGCAGGTGTTTGCCACTGACCCGACGCTGCAACAAAGCGGCGCGGTGATCCTC
GGCGAACCGGCGGCGGGCTACGTTTCCCACGAGGGCTACGCCGCGCTGGCGCAGGCACCGTATCGTTATCAGGAGATGCT
CGGCGTTATCTGGCGCGAGAATCCGTTCCGCTGGCTGAAGTCCGATGAAATCCCAATTCTGATGGCGACCCTGATGGAGT
GCGATGAGCACAACCGGCCGCTGATTGGCGCGTATATCGCCCAGTCCGGGATGGATGCGGAAGCCTGGCTGTCGCAGATG
TTCCGCGTGGTGGTGGTGCCGCTCTACCACCTGCTGTGCCGCTACGGCGTCGCGCTGATCGCCCACGGACAAAATATTAC
CCTCGCCATGAAAAATGGCGTGCCGCAGCGCGTTCTGTTGAAGGATTTTCAGGGCGACATGCGGCTGGTGAAGGATGAGT
TCCCGGAGATGGACTCCCTGCCTCAGGAAGTGCGGGATGTTACCGCCCGCCTGAGCGCCGACTATCTGATTCATGATTTG
CAGACCGGCCACTTTGTGACGGTGTTGCGCTTTGTTTCGCCGCTTATGGTACGCCTCGGCGTGCCGGAGAGACGTTTTTA
TCAACTGCTGGCGACAGTGTTGAGTGATTACATGCAGGAACACCCACAACTGTCAGCGCGTTTCGCGCTTTTCTCACTCT
TCAGGCCACAAATCATTCGCGTCGTGCTGAACCCGGTAAAACTGACCTTCCCTGACCAGGACGGCGGCAGCCGCATGCTG
CCGAATTACCTCGAGGATCTGCAAAACCCGCTGTGGCTGGCGACAAAGGATTAA

Protein sequence :
MNRMDWEIVNRQLVAKMLAELEYEQVFHAESLGDDRYAINLPGAEWHFSAQRGIWGWLWIDHETLRCADEPVVAQTLLMQ
LKPVLSMSDATVAEHMQDLYATLLGDLQLRNARRGMSAEDLIALDADRLQCLLSGHPKFAFNKGRRGWGRDALTRYAPEY
ANTFQLHWLAVKRDNMVWRCDSALDSEQLLTAAMDPQELARFHQAWQARGLDKSWLALPVHPWQWQQKIALDFVADLAEG
RMVSLGEFGDRWLAQQSLRTLTNASRQVGLDIKLPLTIYNTSCYRGIPGKYIAAGPLASRWLQQVFATDPTLQQSGAVIL
GEPAAGYVSHEGYAALAQAPYRYQEMLGVIWRENPFRWLKSDEIPILMATLMECDEHNRPLIGAYIAQSGMDAEAWLSQM
FRVVVVPLYHLLCRYGVALIAHGQNITLAMKNGVPQRVLLKDFQGDMRLVKDEFPEMDSLPQEVRDVTARLSADYLIHDL
QTGHFVTVLRFVSPLMVRLGVPERRFYQLLATVLSDYMQEHPQLSARFALFSLFRPQIIRVVLNPVKLTFPDQDGGSRML
PNYLEDLQNPLWLATKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucC NP_839221.1 siderophore biosynthesis protein Virulence SHI-2 Protein 0.0 86
iucC NP_709456.1 siderophore biosynthesis protein Virulence SHI-2 Protein 0.0 86
iucC YP_002414044.1 Aerobactin siderophore biosynthesis protein Virulence Not named Protein 0.0 86
iucC AAD44748.1 IucC Virulence SHI-2 Protein 0.0 85
iucC AAK71633.1 IucC Virulence SHI-3 Protein 0.0 85

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pecwa_0949 YP_003258374.1 IucA/IucC family protein VFG0617 Protein 0.0 86
Pecwa_0949 YP_003258374.1 IucA/IucC family protein VFG0938 Protein 0.0 86
Pecwa_0949 YP_003258374.1 IucA/IucC family protein VFG1083 Protein 0.0 85