Gene Information

Name : Pecwa_0948 (Pecwa_0948)
Accession : YP_003258373.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Virulence
Product : siderophore biosynthesis protein
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1670
EC number : -
Position : 1019513 - 1020460 bp
Length : 948 bp
Strand : +
Note : PFAM: Siderophore biosynthesis protein, conserved region; KEGG: cko:CKO_00972 hypothetical protein

DNA sequence : 
ATGTCTATGGCCAATATCGTTCACAGCGGCCACGGCCTGCGCTGTGAAAAACTCGACGCACAACTGACTCTCGGCTGGGG
CCAGGATAACAGCGCGGTGCTGCGCTGGCCGGGTCCGTTGCCGGAAGGCTGGCTGCGCGATGCGCTGGACCAGATTTTCA
TCGCCGCGCCGCAGATCTCCGCGCTGATTTTGCCTTACGCCGACTGGCGCGAGGAGCCGCAGGCGCTGGCGCTTTTTGCG
CAGATGCACAGCGATATTATTCATCGCGCCGTGTTCTGGCAGCTCCCACTCTGGCTGAGCGCGCCGTCAAAACAGGCCTC
CGGCGAAATGACCTTTGACGCAGAACGTGAAATCTACTTCCCTGCTCGCCCGGCGCGCCCGGAGGGTGAGGTTTATCGTC
GTTACGATCCACGCGTGCGTAAAACCCTGAGTTTCCGCGTGGCAGACCCGGCGCTGGACGCCGAACGTTTTACCCGCTGG
ATGAACGATCCGCGTGTGGAATATTTCTGGGAGCAAGGCGGTTCCCTTGCGCTACAAACCGCCTATCTCGAACGCCAGCT
CACCGGAAAACATGCGTTTCCGTTGATTGGCTGTTTTGACGATCAGCCGTTCAGCTACTTTGAAATTTACTGGGCAGCGG
AAGATCGTATCGGCCGCCACTATACCTGGCAGCCCTACGATCGCGGTCTGCACCTACTGGTCGGCGAACAGGCCTGGCGA
GGCGCGCACTATGTTCAAAGCTGGCTGCGCGGGCTGACGCACTATTTGCTGCTGGATGAACCGCGCACGCAGCGCACGGT
GCTGGAGCCGCGCGCCGACAACCAGCGCCTGTTCCGCCACTTCGATCCGGCGGGCTACCGCACGCTGAAAGAGTTCGACT
TCCCGCATAAACGTTCGCGCCTGGTGATGGCAGATCGCACCCGCTTCTTTATGGAGGTGGGCCTGTGA

Protein sequence : 
MSMANIVHSGHGLRCEKLDAQLTLGWGQDNSAVLRWPGPLPEGWLRDALDQIFIAAPQISALILPYADWREEPQALALFA
QMHSDIIHRAVFWQLPLWLSAPSKQASGEMTFDAEREIYFPARPARPEGEVYRRYDPRVRKTLSFRVADPALDAERFTRW
MNDPRVEYFWEQGGSLALQTAYLERQLTGKHAFPLIGCFDDQPFSYFEIYWAAEDRIGRHYTWQPYDRGLHLLVGEQAWR
GAHYVQSWLRGLTHYLLLDEPRTQRTVLEPRADNQRLFRHFDPAGYRTLKEFDFPHKRSRLVMADRTRFFMEVGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucB NP_839222.1 siderophore biosynthesis protein Virulence SHI-2 Protein 3e-127 84
iucB NP_709455.1 siderophore biosynthesis protein Virulence SHI-2 Protein 3e-127 84
iucB AAK71632.1 IucB Virulence SHI-3 Protein 2e-127 84
iucB AAD44747.1 IucB Virulence SHI-2 Protein 3e-127 83
iucB YP_002414045.1 aerobactin siderophore biosynthesis protein, N(6)-hydroxylysine acetylase Virulence Not named Protein 2e-126 83

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pecwa_0948 YP_003258373.1 siderophore biosynthesis protein VFG0616 Protein 1e-127 84
Pecwa_0948 YP_003258373.1 siderophore biosynthesis protein VFG1082 Protein 1e-127 84
Pecwa_0948 YP_003258373.1 siderophore biosynthesis protein VFG0939 Protein 7e-127 83