Gene Information

Name : Pecwa_0947 (Pecwa_0947)
Accession : YP_003258372.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Virulence
Product : IucA/IucC family protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4264
EC number : -
Position : 1017788 - 1019512 bp
Length : 1725 bp
Strand : +
Note : PFAM: IucA/IucC family protein; KEGG: ses:SARI_02152 hypothetical protein

DNA sequence :
ATGACTTTGCCAAAGAAAACTCCGACCTGGGATGTCGCTGCGCAGTGCTTCCTGAACGCGCTTATTCGTGAAACCAGAAC
GTGGCGACTGACCGAAAGCCAGCCTGCTGAACTGATTATCCCCCTCGACGATCGTCAGGCGCTGCATTTCACGGTGGACT
ACTTCTCACCGACTCAGCATCACCGTTTCGCCTTCCCGGCTCAGTTAGTGAGCGCTTCGGATCGCGAGCCTGTCGATTTC
CCGACATTTTCCCGTCTCATTGTTGATACGCTCCGGCATACGCTGTCGCTGCCCGCGTCTCACGCCGATGCGTTTTACCA
GCGCGTCACCCAAAGCCATACGCATACGCAGCAGGCCATCGACGCTCGTCACGACTGGGCCACCCTGCGCGAGCACGCGC
TGAACTTTGGCGAAGCGGAACAAGCGCTGCTGGTGGGCCACGCGTTCCATCCGGCACCAAAATCGCATGAACCCTTTACC
CGACAGGAGGCGGAGCGCTATCTGCCGGACTTCGCTCCCCACTTCTCGCTGCGCTGGTTTTCGGTTGATAAAGCGTACAT
CGCGGGCGACAGCCTGCATCTGAATCTGCAACAGCGCCTGACGCGCTTTGCCGCCGAAAACGCCCCACAGTTGCTCAGTG
AACTGAGCAATAGCCAGTGGCTTTTCCCACTGCATCCGTGGCAGGCCGCATATCTGCTGGAACAGCCATGGTGCCAGCAG
TTGGCGGAGCAGGGGCTACTGCGGGATCTGGGCGAAGCCGGTACGCCGTGGCTGCCGACCACCTCTTCCCGTTCGCTTTA
CTGCGCCACCAGCCGCGACATGATCAAGTTTTCGCTCAGCGTGCGCCTGACCAACTCCGTGCGCACCCTGTCGGTGAAAG
AAGTGACGCGCGGCATGCGCCTGGCGCGTCTGGCGCAAACGGAACGCTGGCAGATGCTGCAAACCCGTTTCCCGACGTTC
CAGGTGATGCAGGAGGACGGCTGGGGGGGGCTGCGCGATCTGCACGGCAATATCATGGCGGAAAGCCTGTTTGCCCTGCG
TGAAAACCTGCTGGTCGATCGGCCACAAAGCCAGACCAACGTACTGGTGTCTCTGACGCAGGCCGCACCGGATGGCGGCG
ATTCGCTGCTGGTCGCGGCAGTCAAACGCCTGAGCGCACGTCTGGGGATCACGCCGCAGCAGGCCGCCCACACGTGGGTT
GACGCCTACTGCCAGCAGGTACTGAAACCGCTGTTCACAGCCGAAGCGGATTACGGCCTGGTCCTGCTGGCGCATCAGCA
AAATATTCTGGTGGAGATGCAGCAGGATCTCCCCATCGGGCTTATCTACCGCGACTGCCAGGGCAGCGCGTTTATGCCAC
ATGCGGCGGGCTGGCTCGACGTTATCGGCGAGGCGCAGGCTGAAAATATTTTCACCCACGAGCAATTGCTGCGCTACTTC
CCGTACTACCTGCTGGTGAACTCCACCTTCGCCGTCACCGCCACGCTGGGCGCTGCCGGGCTGGACAGCGAAGTTAGCCT
GATGGCGCGGGTACGCATGCAGCTTTGCGCGGTGCGCGAACAGGTGACGTACAAGACCTGTCTCGACTACGTGCTGGAAA
GCCCATTCTGGAACGTGAAAGGCAACTTCTTCTGTTACCTGAACGATCACAACGAAAACACCATCGTCGACCCATCGGTC
ATCTATTTCGATTTCGCCAACCCGCTGCTGGCGCAGGAGTCCTGA

Protein sequence :
MTLPKKTPTWDVAAQCFLNALIRETRTWRLTESQPAELIIPLDDRQALHFTVDYFSPTQHHRFAFPAQLVSASDREPVDF
PTFSRLIVDTLRHTLSLPASHADAFYQRVTQSHTHTQQAIDARHDWATLREHALNFGEAEQALLVGHAFHPAPKSHEPFT
RQEAERYLPDFAPHFSLRWFSVDKAYIAGDSLHLNLQQRLTRFAAENAPQLLSELSNSQWLFPLHPWQAAYLLEQPWCQQ
LAEQGLLRDLGEAGTPWLPTTSSRSLYCATSRDMIKFSLSVRLTNSVRTLSVKEVTRGMRLARLAQTERWQMLQTRFPTF
QVMQEDGWGGLRDLHGNIMAESLFALRENLLVDRPQSQTNVLVSLTQAAPDGGDSLLVAAVKRLSARLGITPQQAAHTWV
DAYCQQVLKPLFTAEADYGLVLLAHQQNILVEMQQDLPIGLIYRDCQGSAFMPHAAGWLDVIGEAQAENIFTHEQLLRYF
PYYLLVNSTFAVTATLGAAGLDSEVSLMARVRMQLCAVREQVTYKTCLDYVLESPFWNVKGNFFCYLNDHNENTIVDPSV
IYFDFANPLLAQES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucA NP_709454.2 siderophore biosynthesis protein Virulence SHI-2 Protein 0.0 83
iucA AAD44746.1 IucA Virulence SHI-2 Protein 0.0 83
iucA NP_839223.1 siderophore biosynthesis protein Virulence SHI-2 Protein 0.0 83
iucA YP_002414046.1 aerobactin siderophore biosynthesis protein Virulence Not named Protein 0.0 83
iucA AAK71631.1 IucA Virulence SHI-3 Protein 0.0 78

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pecwa_0947 YP_003258372.1 IucA/IucC family protein VFG0615 Protein 0.0 83
Pecwa_0947 YP_003258372.1 IucA/IucC family protein VFG0940 Protein 0.0 83
Pecwa_0947 YP_003258372.1 IucA/IucC family protein VFG1081 Protein 0.0 78