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Name : Pecwa_0946 (Pecwa_0946) Accession : YP_003258371.1 Strain : Pectobacterium wasabiae WPP163 Genome accession: NC_013421 Putative virulence/resistance : Virulence Product : major facilitator superfamily protein Function : - COG functional category : - COG ID : - EC number : - Position : 1016444 - 1017655 bp Length : 1212 bp Strand : - Note : PFAM: major facilitator superfamily MFS_1; KEGG: cko:CKO_00976 hypothetical protein DNA sequence : GTGACTCCTCTTGAGATAGCCGACGCGCCGCAAAAATCCTTGTCCTGTTGGCCGCTGGCGTTCAGCGCGGGGCTACTTGG CGTCGGGCAGAATGGCCTGCTGGTGGCGATCCCGGTTCTGGTGATTCAGACAAACCTTAGCCTGTCGATTTGGGCGGCGC TTTTAACGCTTGGCTCAATGCTGTTTCTGCCATCGTCGCCGTGGTGGGGAAAACAGATCGCGCGCCGGGGCAGCAAACCG GTGGTGCTCTGGGCGCTGGGGGGATACGGCGCGAGCTTTGCGCTGCTTGGCCTGGGCAGCGTGCTGCTGGCGACTCACGC CATTCCTCCGGGGGCGGGCATCGGGTTGTTAATTATCGCACGGATTATCTACGGGCTTACCGTGTCGGCGATGGTTCCGG CCTGTCAGGTCTGGGCCTTACAGCGCGCAGGGGAAGCCAAACGAATGGCGGCGCTGGCGACCATCAGTTCGGGATTAAGC TGCGGTCGACTGTTCGGGCCGCTGTGCGCCGCGGCGATGCTGACGCTGCATCCGCTTGCGCCGATGGCGCTGTTAATGGT CGCGCCGCTGCTGGCGCTTATCATGCTGCTGCGTTTACCGGGCACGCCGCCGCAGCCCGCAGCCAGTCGCAAAAGCGTGC GCCTCACGCCTGTATGCCTGCCGTATCTCCTCTGCGCGCTGCTGCTGTCGGCGACCGTCAGCCTGATGCAGCTTGGCCTG TCTCCCGCGCTCGCCCGCCAGTTCGCCACGGATACCGCCGCGATTAGTCATCAGGTAGCGTGGCTGCTCAGCGTGGCGGC GGTAGCATCGCTGATTGCTCAGTTTGGCGTGCTGCGCCCCCAGCGGCTGACGCCGATGGCGCTGCTGTTAAGCGCCGGGG CACTCATGTTATGCGGTCTGGCGTTGATGATATCTGTTCCGCTGTGGCTGTTTTATCCCGGCTGCGCACTGCTCTCCTTC GGGGCTGCGCTGGCGACGCCCGCCTATCAGCTTCTGCTTAACGACAAACTTGCCGACGGCGCGGGCGCAGGCTGGGTTGC CACCAGCCACACGCTGGGCTACGGACTTTGCGCCATGCTAGTGCCGCTGGTCTCGCGAACCGGCATCAGCGTGGCGCTGC TGGTGACGGCTTTTGTCGCCGCCGCTATCTTCACCGGGGTGTCTGGCTTTATCTGGCTCAGCCGCCGCCATTCATCGTCT TCCGCAATCTAA Protein sequence : MTPLEIADAPQKSLSCWPLAFSAGLLGVGQNGLLVAIPVLVIQTNLSLSIWAALLTLGSMLFLPSSPWWGKQIARRGSKP VVLWALGGYGASFALLGLGSVLLATHAIPPGAGIGLLIIARIIYGLTVSAMVPACQVWALQRAGEAKRMAALATISSGLS CGRLFGPLCAAAMLTLHPLAPMALLMVAPLLALIMLLRLPGTPPQPAASRKSVRLTPVCLPYLLCALLLSATVSLMQLGL SPALARQFATDTAAISHQVAWLLSVAAVASLIAQFGVLRPQRLTPMALLLSAGALMLCGLALMISVPLWLFYPGCALLSF GAALATPAYQLLLNDKLADGAGAGWVATSHTLGYGLCAMLVPLVSRTGISVALLVTAFVAAAIFTGVSGFIWLSRRHSSS SAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAD54670.1 | unknown | Not tested | SHI-2 | Protein | 5e-85 | 80 |
| shiF | AAD44744.1 | ShiF | Virulence | SHI-2 | Protein | 1e-85 | 80 |
| shiF | YP_002414047.1 | putative membrane transport protein, major facilitator superfamily | Not tested | Not named | Protein | 5e-85 | 80 |
| imm | NP_839224.1 | membrane transport protein | Not tested | SHI-2 | Protein | 2e-85 | 80 |
| imm | NP_709453.1 | membrane transport protein | Not tested | SHI-2 | Protein | 2e-85 | 80 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pecwa_0946 | YP_003258371.1 | major facilitator superfamily protein | VFG0614 | Protein | 7e-86 | 80 |
