Gene Information

Name : Pecwa_0710 (Pecwa_0710)
Accession : YP_003258138.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 744192 - 745166 bp
Length : 975 bp
Strand : +
Note : PFAM: integrase; KEGG: yen:YE3450 phage integrase

DNA sequence :
ATGACTGTAACCTATGAAGATATCATTCAGGATTACTTTTTTAGTAAGCCTTTACGACCTGCAACCGAAATAAGCTACAA
GAAAGTACTGAATCTTTTTTTAAGATTCACGGGAGAGAAGGTTCTACCGGCTGATGTAGATCGTCATACGGTGCTCAGTT
GGCGGAGACATCTGTTGAATGAGCGCCAGCTCTCTACTATCACATGGAATAACCGGGTAGCTCACATGCGTGCCATTTTT
AATCACGCAATGAAATATGATTTTGTGCAAATGAAAGAGAATCCCTTTAACAGTGTGGTAGCCAGACCTGATGTTAAGCG
TAAAAAAACGCTATCAGAAGAACAGATCCGAAAAATCTATTTGGTGATGGAAGCCAGAGAAGAAAAAGAGTTTGAGGATT
GTGATTTCCGAAGTGCACTACGCCCAGCCTGGTTCTGGCTGACAGTCATCGATACGCTGCGCTATACGGGCATGCGGCAA
AACCAGCTGCTACACATTCGTCTGGAAGACGTTAATCTGGATGAGGGCTGGATAAATCTGCGGCCAGAGGCTTCCAAAAA
TCATAAAGAGCATATCGTCCCAATCACGACGTTACTCAGGCCACGCCTGGAGCGACTTTATCATGCCGCGCTTAATCAGG
ATGCGAACATGGGGGATCAACTTTTCAACGTTCATCTGTTTAAAGGACGGAAAAGCAATGTATCCAAAAACATGGATCCT
CCACCAATGCGGGCTTTTTTTCGTCGACTGTCAGTGGAATGCCGTTGCACGATAAGCCCACACCGATTCAGGCATACGAT
CGCCACTGAGATGATGAAATCACCGGATCGTAATCTCAAAATTGTTCAGACGCTACTGGGACACTCGAATGTCAGCGTGA
CGCTGGAATATGTGGAAGGGAACATGGATATTGTCAGGAATGCGCTGGAGCAGGAATTTAGCAGGAAAAGTGTGCGCGTT
GCCGGCACAGTATGA

Protein sequence :
MTVTYEDIIQDYFFSKPLRPATEISYKKVLNLFLRFTGEKVLPADVDRHTVLSWRRHLLNERQLSTITWNNRVAHMRAIF
NHAMKYDFVQMKENPFNSVVARPDVKRKKTLSEEQIRKIYLVMEAREEKEFEDCDFRSALRPAWFWLTVIDTLRYTGMRQ
NQLLHIRLEDVNLDEGWINLRPEASKNHKEHIVPITTLLRPRLERLYHAALNQDANMGDQLFNVHLFKGRKSNVSKNMDP
PPMRAFFRRLSVECRCTISPHRFRHTIATEMMKSPDRNLKIVQTLLGHSNVSVTLEYVEGNMDIVRNALEQEFSRKSVRV
AGTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YpsIP31758_3686 YP_001402640.1 phage integrase Not tested YAPI Protein 1e-111 71
api95 CAF28569.1 putative phage integrase Not tested YAPI Protein 7e-112 71
YE3450 YP_001007614.1 phage integrase Not tested YAPI Protein 3e-113 71
STY4666 NP_458745.1 probable phage integrase Not tested SPI-7 Protein 8e-79 54
t4357 NP_807950.1 phage integrase Not tested SPI-7 Protein 8e-79 54