Gene Information

Name : Pecwa_0680 (Pecwa_0680)
Accession : YP_003258108.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 720255 - 721682 bp
Length : 1428 bp
Strand : +
Note : KEGG: spq:SPAB_05392 hypothetical protein

DNA sequence :
ATGAAAACAAAGCAAACGCGCTATTCCCCGTCCGTCTCTATTTTATCCGGCATTCTGGCCATCACGATCCTCGGCACAGC
AACTCATGTGGGAGCTGAAATTAATACTTCACCCTCCGGGGCATCTGTCAGCGGTGCGGTCAGTGACGGGCTGTTCTATT
CGATCGGTGGCGGTACGGTGATATCACCTCCGTCATCACGAAACAGCATGACGCGTCTGGGCGTTACCGGTGGTTGGAGC
AGCGACCTGATGTGCGGCAATTTCGATATGAAAACGACAGTCGGTAATCAGCTTAACGGTATTACCAGTGGCTTTAAGGA
TCTGATGGGAACCGTGATTCAGGGGGCTACCGGTGCTGTGGCCAGTATGCCGGCGATGGTCATCCAGCGTGCCAATCCTG
CGCTGTATGAAATGCTGACCAATGGTGTGTTGCAGGCAGGACTCAGCTTTGACAAGGCCAAGCTGAGTTGCCAGAGCATG
GCCAACAAAATGGCCGATTATACCGTGGGTAATAAATGGACTCAGGCTGCAGTTGTGGAGGAATACAAGGATATTGTGGC
ATCCAGTAACGGCGATGCAGTCAGTAGCGACCAGAAGTTGCAGAAAGCGACAGGGGAAGAAGGGGCCACCTGGATTGGTG
GCCAAAAACGCGGTGGAAAGGGACAGGCAGCTATCAGGCCCACCCGGGATTTGGCGAAAGCCGGCTTCAATATGATGAAT
AACCTGCCAGTGACGAGTAACAGCAGTGTCAGCTCATCAAGCTGCAACGGTACATCATGCCAGCGTTTCCCTTCTTCTGA
AAAAGCGGCTGAAGCGGTAGTCAAGGTACTCGGCGATCGCTCGATTCGTACCTGCCGGGATGCCAGTCAGTGTTCAAGTG
GCGGCGTGGAGAACGAACCTGGGAGCAGTGTTGCCGGCACGGGATTCTCCCCAATGCTGGAAGAAGCAACAAAAGAAAAT
ACGGAGCAGTTGGTAAAACTGGTTGGCGGTGCTGAAGCGCCGACGGCCAGCAATTTGGCCAAGCTCAAAACAGGCAGCAT
GGTTGTGACGCGTAGCGTTATCCAGTCCCTGAAAGATGATCCGGACAATAGCGCACTCATTCAGCGTTTAGCCGGTGAAC
TGGCGATGTCGGATACCGTTGAAACCGCACTGACGATGCGCAGGATGCTGACTACGGGACAATCCGAACCGAATGCAGCC
GATCAACCTGAAGCGCTGTCTGAAGGTGACCGGCGTATTGATGCTCTGGACAGGGAGTTGGCTGCATTGAAAAATGAAAT
GGATATCCGTAAAGCCATCAGTAACAACAGCTTGCTGACCACGCTGGAACGTCAGGGAGTACGTAATCAAGGCAACCGGT
TCCAGCAAAAGAGTGGGAGCCAGGATCAAGGCTTTAACGGATTGAGCCAGAATCAGGGAGGGCAGTAA

Protein sequence :
MKTKQTRYSPSVSILSGILAITILGTATHVGAEINTSPSGASVSGAVSDGLFYSIGGGTVISPPSSRNSMTRLGVTGGWS
SDLMCGNFDMKTTVGNQLNGITSGFKDLMGTVIQGATGAVASMPAMVIQRANPALYEMLTNGVLQAGLSFDKAKLSCQSM
ANKMADYTVGNKWTQAAVVEEYKDIVASSNGDAVSSDQKLQKATGEEGATWIGGQKRGGKGQAAIRPTRDLAKAGFNMMN
NLPVTSNSSVSSSSCNGTSCQRFPSSEKAAEAVVKVLGDRSIRTCRDASQCSSGGVENEPGSSVAGTGFSPMLEEATKEN
TEQLVKLVGGAEAPTASNLAKLKTGSMVVTRSVIQSLKDDPDNSALIQRLAGELAMSDTVETALTMRRMLTTGQSEPNAA
DQPEALSEGDRRIDALDRELAALKNEMDIRKAISNNSLLTTLERQGVRNQGNRFQQKSGSQDQGFNGLSQNQGGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YpsIP31758_3700 YP_001402654.1 hypothetical protein Not tested YAPI Protein 7e-150 82
YE3466 YP_001007627.1 hypothetical protein Not tested YAPI Protein 1e-150 82
api55 CAF28529.1 putative exported protein Not tested YAPI Protein 7e-151 82
unnamed AAX39459.1 unknown Not tested Hrp PAI Protein 4e-150 77
STY4577 NP_458662.1 hypothetical protein Not tested SPI-7 Protein 4e-130 63
t4274 NP_807872.1 hypothetical protein Not tested SPI-7 Protein 4e-130 63
PMI2572 YP_002152291.1 hypothetical protein Not tested Not named Protein 2e-115 56
ORF C42 AAN62135.1 hypothetical protein Not tested PAGI-2(C) Protein 4e-67 43