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Name : Pecwa_0642 (Pecwa_0642) Accession : YP_003258073.1 Strain : Pectobacterium wasabiae WPP163 Genome accession: NC_013421 Putative virulence/resistance : Unknown Product : lytic transglycosylase Function : - COG functional category : - COG ID : - EC number : - Position : 682066 - 682716 bp Length : 651 bp Strand : + Note : PFAM: lytic transglycosylase catalytic; KEGG: ypi:YpsIP31758_3720 transglycosylase SLT domain-containing protein DNA sequence : ATGGCAAATCGCAGCATTTTAATCAGTATGCTCATCGTACTTGGGATAATGCATAGCGGTATTGTTAGCGCACAAAAACG TCCTGTTGCCTTGCAACAAATCCCAGCGGCATACCGACAAATTGCTAAAGATGCGCGTGTGCCAGCTGAGTCACTTTATT CACTTGCACTAACGGAAAGCTCTCGTCGATTGCCTTACGGTGAGCGGCCATGGCCGTGGTCGATCAATGTTGCCGGAAAA ACGTATCGGTATGAGACACGCGAATTGGCATGGCAGGCGTTACGCCAGTTTATTCGCCAGACACCGCTAAAGAACATTGA TGTTGGGATCGCTCAGGTTAATTTGGGCTGGAACGGACATCGTTTTCGCTCTTTTTATGACGCATTTGAGCCGTTTACCA ATTTACGTGTTGCTGCCCGAATCTTACGTGAGTGCTATGACGCAAAACCTGATAGTTGGTTACGTGCCGCAGGGTGTTAT CACCGTCCTGCCGGCGGCCTGCCAACTGAAAGGTATATGGCGATTGTGCGCCAAAAGCTGAAGCTTATTTCTCCAGTTCA GGAACCATTAGAGTCATCACCGCCCATCCTACTTGCCTCTTCCGAAGCAATTATTCCCAGCTACCAATTAACATGGATAG AGCCAGAATGA Protein sequence : MANRSILISMLIVLGIMHSGIVSAQKRPVALQQIPAAYRQIAKDARVPAESLYSLALTESSRRLPYGERPWPWSINVAGK TYRYETRELAWQALRQFIRQTPLKNIDVGIAQVNLGWNGHRFRSFYDAFEPFTNLRVAARILRECYDAKPDSWLRAAGCY HRPAGGLPTERYMAIVRQKLKLISPVQEPLESSPPILLASSEAIIPSYQLTWIEPE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YE3494A | YP_001007653.1 | hypothetical protein | Not tested | YAPI | Protein | 2e-54 | 63 |
| YpsIP31758_3720 | YP_001402674.1 | transglycosylase | Not tested | YAPI | Protein | 5e-61 | 60 |
| api25 | CAF28499.1 | conserved hypothetical protein | Not tested | YAPI | Protein | 3e-61 | 60 |
| STY4559 | NP_458645.1 | hypothetical protein | Not tested | SPI-7 | Protein | 2e-44 | 55 |
| t4257 | NP_807855.1 | hypothetical protein | Not tested | SPI-7 | Protein | 2e-44 | 55 |
| PMI2591 | YP_002152310.1 | lytic transglycosylase | Not tested | Not named | Protein | 1e-47 | 53 |
| pph70 | CAI36111.1 | soluble lytic murein transglycosylase | Not tested | PPHGI-1 | Protein | 2e-25 | 46 |
| unnamed | ABR13378.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 1e-23 | 45 |
| EXA50 | ABD94659.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 3e-24 | 45 |
| ORF SG70 | AAN62292.1 | conserved hypothetical protein | Not tested | PAGI-3(SG) | Protein | 1e-23 | 42 |
